2.7.7.B16: DNA primase
This is an abbreviated version!
For detailed information about DNA primase, go to the full flat file.
Word Map on EC 2.7.7.B16
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2.7.7.B16
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single-stranded
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helicase
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polymerases
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bacteriophage
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primases
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fork
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priming
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oligoribonucleotides
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dnab
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polydt
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alpha-primase
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okazaki
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dna-dependent
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aphidicolin
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ssdna
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lagging-strand
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replisome
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alpha-amanitin
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primer-template
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rntp
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helicase-primase
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polymerase-primase
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rna-primed
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polymerase-alpha
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alpha-dna
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primosome
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primpol
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template-primer
- 2.7.7.B16
-
single-stranded
- helicase
- polymerases
- bacteriophage
- primases
- fork
-
priming
- oligoribonucleotides
- dnab
-
polydt
-
alpha-primase
-
okazaki
-
dna-dependent
- aphidicolin
- ssdna
-
lagging-strand
-
replisome
- alpha-amanitin
-
primer-template
- rntp
-
helicase-primase
-
polymerase-primase
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rna-primed
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polymerase-alpha
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alpha-dna
-
primosome
- primpol
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template-primer
Reaction
Synonyms
archaeal eukaryotic-type primase, DNA primase-polymerase, DnaG primase, Mjpri, Pabp41, Pabp46, pIT3 replication protein, PolpTN2, PriL, PriS, PriSL, PriX, Sso core primase, SsoPriSL
ECTree
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Subunits
Subunits on EC 2.7.7.B16 - DNA primase
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heterodimer
heterotrimer
archaea encode a eukaryotic-type primase comprising a catalytic subunit, PriS, and a noncatalytic subunit, PriL and PriX. PriX is a diverged homologue of the C-terminal domain of PriL but lacks the iron-sulfur cluster. PriX, PriL and PriS form a stable heterotrimer (PriSLX). Both PriSX and PriSLX show far greater affinity for nucleotide substrates and are substantially more active in primer synthesis than the PriSL heterodimer. PriL, but not PriX, facilitates primer extension by PriS. The catalytic activity of PriS is modulated through concerted interactions with the two noncatalytic subunits in primer synthesis. PriX subunit residues 26-54 are in a flexible region. PriX residues 55-154 fold into a single domain containing 6 helices, which form a compact core stabilized by extensive hydrophobic interactions. The overall structure of the PriX protein is quite unique, sequence and three-dimensional structure comparisons, overview
additional information
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x * 29000, Rep245 domain containing the N-terminal domain of the pIT3 replication protein encompassing residues 31245, SDS-PAGE
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x * 29000, Rep245 domain containing the N-terminal domain of the pIT3 replication protein encompassing residues 31245, SDS-PAGE
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heterodimer
Q9P9H1; Q8U4H7
1 * 46209 (large subunit Pfup46) + 1 * 40772 (small subunit Pfup41), calculated from sequence
Q9P9H1; Q8U4H7
the Pfup46 protein increases the affinity of the primase to DNA by forming a complex with the catalytic Pfup41 subunit
additional information
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the Pfup46 protein increases the affinity of the primase to DNA by forming a complex with the catalytic Pfup41 subunit