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Reference on EC 1.3.8.4 - isovaleryl-CoA dehydrogenase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Matsubara, Y.; Indo, Y.; Naito, E.; Ozasa, H.; Glassberg, R.; Vockley, J.; Ikeda, Y.; Kraus, J.; Tanaka, K.
Molecular cloning and nucleotide sequence of cDNAs encoding the precursors of rat long chain acyl-coenzyme A, short chain acyl-coenzyme A, and isovaleryl-coenzyme A dehydrogenases. Sequence homology of four enzymes of the acyl-CoA dehydrogenase family
J. Biol. Chem.
264
16321-16331
1989
Rattus norvegicus
Manually annotated by BRENDA team
Ikeda, Y.; Tanaka, K.
Isovaleryl-CoA dehydrogenase from rat liver
Methods Enzymol.
166
374-389
1988
Rattus norvegicus
Manually annotated by BRENDA team
Finocchiaro, G.; Ito, M.; Tanaka, K.
Purification and properties of short chain acyl-CoA, medium chain acyl-CoA, and isovaleryl-CoA dehydrogenases from human liver
J. Biol. Chem.
262
7982-7989
1987
Homo sapiens
Manually annotated by BRENDA team
Ikeda, Y.; Tanaka, K.
Purification and characterization of isovaleryl coenzyme A dehydrogenase from rat liver mitochondria
J. Biol. Chem.
258
1077-1085
1983
Rattus norvegicus
Manually annotated by BRENDA team
Ikeda, Y.; Dabrowski, C.; Tanaka, K.
Separation and properties of five distinct acyl-CoA dehydrogenases from rat liver mitochondria. Identification of a new 2-methyl branched chain acyl-CoA dehydrogenase
J. Biol. Chem.
258
1066-1076
1983
Rattus norvegicus
Manually annotated by BRENDA team
Rhead, W.J.; Hall, C.; Tanaka, K.
Novel tritium release assays for isovaleryl-CoA and butyryl-CoA dehydrogenases
J. Biol. Chem.
256
1616-1624
1981
Cavia porcellus, Rattus norvegicus
Manually annotated by BRENDA team
Noda, C.; Rhead, W.J.; Tanaka, K.
Isovaleryl-CoA dehydrogenase: demonstration in rat liver mitochondria by ion exchange chromatography and isoelectric focusing
Proc. Natl. Acad. Sci. USA
77
2646-2650
1980
Rattus norvegicus
Manually annotated by BRENDA team
Rhead, W.J.; Tanaka, K.
Demonstration of a specific mitochondrial isovaleryl-CoA dehydrogenase deficiency in fibroblasts from patients with isovaleric acidemia
Proc. Natl. Acad. Sci. USA
77
580-583
1980
Homo sapiens
Manually annotated by BRENDA team
Osmundsen, H.; Billington, D.; Sherrat, H.S.A.
Evidence for a separate isovaleryl-coenzyme A dehydrogenase in liver mitochondria
Biochem. Soc. Trans.
2
1286-1288
1974
Rattus norvegicus
-
Manually annotated by BRENDA team
Tanaka, K.; Miller, E.M.; Isselbacher, K.J.
Hypoglycin A: a specific inhibitor of isovaleryl CoA dehydrogenase
Proc. Natl. Acad. Sci. USA
68
20-24
1971
Rattus norvegicus
Manually annotated by BRENDA team
Mohsen, A.W.A.; Vockley, J.
Identification of the active site catalytic residue in human isovaleryl-CoA dehydrogenase
Biochemistry
34
10146-10152
1995
Homo sapiens
Manually annotated by BRENDA team
Hazekawa, I.; Nishina, Y.; Sato, K.; Shichiri, M.; Shiga, K.
Substrate activating mechanism of short-chain acyl-CoA, medium-chain acyl-CoA, long-chain acyl-CoA, and isovaleryl-CoA dehydrogenases from bovine liver: a resonance Raman study on the 3-ketoacyl-CoA complexes
J. Biochem.
118
900-910
1995
Bos taurus
Manually annotated by BRENDA team
Tiffany, K.A.; Roberts, D.L.; Wang, M.; Paschke, R.; Mohsen, A.W.A.; Vockley, J.; Kim, J.J.P.
Structure of human isovaleryl-CoA dehydrogenase at 2.6 ANG resolution: Structural basis for substrate specificity
Biochemistry
36
8455-8464
1997
Homo sapiens
Manually annotated by BRENDA team
Mohsen, A.W.A.; Anderson, B.D.; Volchenboum, S.L.; Battaile, K.P.; Tiffany, K.; Roberts, D.; Kim, J.J.P.; Vockley, J.
Characterization of molecular defects in isovaleryl-CoA dehydrogenase in patients with isovaleric acidemia
Biochemistry
37
10325-10335
1998
Homo sapiens (P26440), Homo sapiens
Manually annotated by BRENDA team
Daschner, K.; Thalheim, C.; Guha, C.; Brennicke, A.; Binder, S.
In plants a putative isovaleryl-CoA-dehydrogenase is located in mitochondria
Plant Mol. Biol.
39
1275-1282
1999
Arabidopsis thaliana
Manually annotated by BRENDA team
Volchenboum, S.L.; Vockley, J.
Mitochondrial import and processing of wild type and type III mutant isovaleryl-CoA dehydrogenase
J. Biol. Chem.
275
7958-7963
2000
Homo sapiens
Manually annotated by BRENDA team
Reinard, T.; Janke, V.; Willard, J.; Buck, F.; Jacobsen, H.J.; Vockley, J.
Cloning of a gene for an acyl-CoA dehydrogenase from Pisum sativum L. and purification and characterization of its product as an isovaleryl-CoA dehydrogenase
J. Biol. Chem.
275
33738-33743
2000
Pisum sativum
Manually annotated by BRENDA team
Faivre-Nitschke, S.E.; Couee, I.; Vermel, M.; Grienenberger, J.M.; Gualberto, J.M.
Purification, characterization and cloning of isovaleryl-CoA dehydrogenase from higher plant mitochondria
Eur. J. Biochem.
268
1332-1339
2001
Arabidopsis thaliana, Solanum tuberosum
Manually annotated by BRENDA team
Willard, J.M.; Reinard, T.; Mohsen, A.W.; Vockley, J.
Cloning of genomic and cDNA for mouse isovaleryl-CoA dehydrogenase (IVD) and evolutionary comparison to other known IVDs
Gene
270
253-257
2001
Mus musculus (Q9JHI5), Mus musculus
Manually annotated by BRENDA team
Mohsen, A.W.A.; Navarette, B.; Vockley, J.
Identification of Caenorhabditis elegans isovaleryl-CoA dehydrogenase and structural comparison with other scyl-CoA dehydrogenases
Mol. Genet. Metab.
73
126-137
2001
Caenorhabditis elegans
Manually annotated by BRENDA team
Daschner, K.; Couee, I.; Binder, S.
The mitochondrial isovaleryl-coenzyme A dehydrogenase of Arabidopsis oxidizes intermediates of leucine and valine catabolism
Plant Physiol.
126
601-612
2001
Arabidopsis thaliana
Manually annotated by BRENDA team
Volchenboum, S.L.; Mohsen, A.W.A.; Kim, J.J.P.; Vockley, J.
Arginine 387 of human isovaleryl-CoA dehydrogenase plays a crucial role in substrate/product binding
Mol. Genet. Metab.
74
226-237
2001
Homo sapiens
Manually annotated by BRENDA team
Nasser, I.; Mohsen, A.W.; Jelesarov, I.; Vockley, J.; Macheroux, P.; Ghisla, S.
Thermal unfolding of medium-chain acyl-CoA dehydrogenase and iso(3)valeryl-CoA dehydrogenase: study of the effect of genetic defects on enzyme stability
Biochim. Biophys. Acta
1690
22-32
2004
Homo sapiens
Manually annotated by BRENDA team
Tajima, G.; Sakura, N.; Yofune, H.; Dwi Bahagia Febriani, A.; Nishimura, Y.; Sakamoto, A.; Ono, H.; Shigematsu, Y.; Kobayashi, M.
Establishment of a practical enzymatic assay method for determination of isovaleryl-CoA dehydrogenase activity using high-performance liquid chromatography
Clin. Chim. Acta
353
193-199
2005
Homo sapiens
Manually annotated by BRENDA team
Goetzman, E.S.; Mohsen, A.W.; Prasad, K.; Vockley, J.
Convergent evolution of a 2-methylbutyryl-CoA dehydrogenase from isovaleryl-CoA dehydrogenase in Solanum tuberosum
J. Biol. Chem.
280
4873-4879
2005
Homo sapiens, Solanum tuberosum (Q9FS87), Solanum tuberosum
Manually annotated by BRENDA team
Goetzman, E.S.; He, M.; Nguyen, T.V.; Vockley, J.
Functional analysis of acyl-CoA dehydrogenase catalytic residue mutants using surface plasmon resonance and circular dichroism
Mol. Genet. Metab.
87
232-242
2006
Homo sapiens
-
Manually annotated by BRENDA team
Lin, W.D.; Wang, C.H.; Lee, C.C.; lai, C.C.; Tsai, Y.; Tsai, F.J.
Genetic mutation profile of isovaleric acidemia patients in Taiwan
Mol. Genet. Metab.
90
134-139
2007
Homo sapiens
Manually annotated by BRENDA team
Yamashita, N.; Sakamoto, K.; Yamada, O.; Akita, O.; Nishimura, A.
The promoter activity of isovaleryl-CoA dehydrogenase-encoding gene (ivdA) from Aspergillus oryzae is strictly repressed by glutamic acid
Biosci. Biotechnol. Biochem.
71
1561-1563
2007
Aspergillus oryzae (Q75N94), Aspergillus oryzae
Manually annotated by BRENDA team
Lee, Y.W.; Lee, D.H.; Vockley, J.; Kim, N.D.; Lee, Y.K.; Ki, C.S.
Different spectrum of mutations of isovaleryl-CoA dehydrogenase (IVD) gene in Korean patients with isovaleric acidemia
Mol. Genet. Metab.
92
71-77
2007
Homo sapiens (P26440), Homo sapiens
Manually annotated by BRENDA team
Foerster-Fromme, K.; Jendrossek, D.
Biochemical characterization of isovaleryl-CoA dehydrogenase (LiuA) of Pseudomonas aeruginosa and the importance of liu genes for a functional catabolic pathway of methyl-branched compounds
FEMS Microbiol. Lett.
286
78-84
2008
Pseudomonas aeruginosa
Manually annotated by BRENDA team
Bonilla Guerrero, R.; Wolfe, L.A.; Payne, N.; Tortorelli, S.; Matern, D.; Rinaldo, P.; Gavrilov, D.; Melan, M.; He, M.; Steinberg, S.J.; Raymond, G.V.; Vockley, J.; Gibson, K.M.
Essential fatty acid profiling for routine nutritional assessment unmasks adrenoleukodystrophy in an infant with isovaleric acidaemia
J. Inherit. Metab. Dis.
31
S453-456
2008
Homo sapiens (P26440), Homo sapiens
Manually annotated by BRENDA team
Yamauchi, N.
The pathway of leucine to mevalonate in halophilic archaea: efficient incorporation of leucine into isoprenoidal lipid with the involvement of isovaleryl-CoA dehydrogenase in Halobacterium salinarum
Biosci. Biotechnol. Biochem.
74
443-446
2010
Halobacterium salinarum, Halobacterium salinarum NRC34001
Manually annotated by BRENDA team
Urano, K.; Daimon, T.; Banno, Y.; Mita, K.; Terada, T.; Shimizu, K.; Katsuma, S.; Shimada, T.
Molecular defect of isovaleryl-CoA dehydrogenase in the skunk mutant of silkworm, Bombyx mori
FEBS J.
277
4452-4463
2010
Bombyx mori (B5UB85), Bombyx mori, Bombyx mori p50T (B5UB85), Bombyx mori c108T (B5UB85)
Manually annotated by BRENDA team
Araujo, W.L.; Ishizaki, K.; Nunes-Nesi, A.; Larson, T.R.; Tohge, T.; Krahnert, I.; Witt, S.; Obata, T.; Schauer, N.; Graham, I.A.; Leaver, C.J.; Fernie, A.R.
Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria
Plant Cell
22
1549-1563
2010
Arabidopsis thaliana (Q9SWG0), Arabidopsis thaliana, Arabidopsis thaliana Col ecotype (Q9SWG0)
Manually annotated by BRENDA team
Gu, L.; Jones, A.D.; Last, R.L.
Broad connections in the Arabidopsis seed metabolic network revealed by metabolite profiling of an amino acid catabolism mutant
Plant J.
61
579-590
2010
Arabidopsis thaliana (Q9SWG0), Arabidopsis thaliana, Arabidopsis thaliana Landsberg erecta (Q9SWG0)
Manually annotated by BRENDA team
Liu, X.; Wu, L.; Deng, G.; Chen, G.; Li, N.; Chu, X.; Li, D.
Comparative studies of acyl-CoA dehydrogenases for monomethyl branched chain substrates in amino acid metabolism
Bioorg. Chem.
47
1-8
2013
Rattus norvegicus (P12007)
Manually annotated by BRENDA team
Luis, P.B.; Ruiter, J.P.; Ijlst, L.; Tavares de Almeida, I.; Duran, M.; Mohsen, A.W.; Vockley, J.; Wanders, R.J.; Silva, M.F.
Role of isovaleryl-CoA dehydrogenase and short branched-chain acyl-CoA dehydrogenase in the metabolism of valproic acid: implications for the branched-chain amino acid oxidation pathway
Drug Metab. Dispos.
39
1155-1160
2011
Rattus norvegicus (P12007)
Manually annotated by BRENDA team
Bei, F.; Sun, J.H.; Yu, Y.G.; Jia, J.; Zheng, Z.J.; Fu, Q.H.; Cai, W.
Two novel isovaleryl-CoA dehydrogenase gene mutations in a Chinese infant
Gene
524
396-400
2013
Homo sapiens
Manually annotated by BRENDA team
Mohsen, A.W.; Vockley, J.
Kinetic and spectral properties of isovaleryl-CoA dehydrogenase and interaction with ligands
Biochimie
108
108-119
2015
Homo sapiens (P26440), Homo sapiens
Manually annotated by BRENDA team
Yamauchi, N.; Tanoue, R.
Deuterium incorporation experiments from (3R)- and (3S)-[3-2H]leucine into characteristic isoprenoidal lipid-core of halophilic archaea suggests the involvement of isovaleryl-CoA dehydrogenase
Biosci. Biotechnol. Biochem.
81
2062-2070
2017
Halobacterium salinarum
Manually annotated by BRENDA team
Karim, R.M.
Identification of isovaleryl-CoA dehydrogenase catalytic residue in Paracoccus denitrificans PD1222
Plant Arch.
20
3091-3096
2020
Paracoccus denitrificans (A1B856), Paracoccus denitrificans Pd1222 (A1B856)
-
Manually annotated by BRENDA team
Hirota, T.; Izumi, M.; Wada, S.; Makino, A.; Ishida, H.
Vacuolar protein degradation via autophagy provides substrates to amino acid catabolic pathways as an adaptive response to sugar starvation in Arabidopsis thaliana
Plant Cell Physiol.
59
1363-1376
2018
Arabidopsis thaliana (Q9SWG0), Arabidopsis thaliana, Arabidopsis thaliana Col-0 (Q9SWG0)
Manually annotated by BRENDA team