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Literature summary for 1.1.1.205 extracted from

  • Shu, Q.; Nair, V.
    Inosine monophosphate dehydrogenase (IMPDH) as a target in drug discovery (2008), Med. Res. Rev., 28, 219-232.
    View publication on PubMed

Application

Application Comment Organism
drug development differences between the human and Mycobacterium tuberculosis IMPDHs in the region of binding of nucleotide inhibitors on the inosine 5'-phosphate binding site. These and other differences, may be exploited for the design of new inhibitors with selectivity against Mycobacterium tuberculosis IMPDH Mycobacterium tuberculosis
drug development type I IMPDH is identified as an antiangiogenic drug target. Inhibition may cause endothelial cell cycle arrest Homo sapiens

Crystallization (Commentary)

Crystallization (Comment) Organism
at 2.18 A resolution Thermotoga maritima
at 2.3 A resolution, in complex with inosine 5'-phosphate and beta-methylene-thiazole-4-carboxyamide-adenine dinucleotide at 2.2 A resolution, in complex with xanthosine 5'-phosphate and NAD+ at 2.15 A resolution, in complex with xanthosine 5'-phosphate and mycophenolic acid at 2.2 A resolution, in complex with RVP and mycophenolic acid at 2.15 A resolution, in complex with 4-carbamoyl-1-beta-D-ribofuranosylimidazolium-5-olate-5'-phosphate at 2.0 A resolution Tritrichomonas suis
at 2.4 A resolution Borreliella burgdorferi
in complex with inosine 5'-phosphate and mycophenolic acid at 2.6 A resolution Cricetulus griseus
in complex with inosine 5'-phosphate at 1.9 A resolution Streptococcus pyogenes
in complex with xanthosine 5'-phosphate at 2.1 A resolution Pyrococcus horikoshii OT3
type I isoform, in complex with 6-chloropurine riboside 5'-monophosphate at 2.5 A resolution Homo sapiens
type II isoform, in complex with 6-chloropurine riboside 5'-monophosphate and selenazole-4-carboxyamide-adenine dinucleotide at 2.9 A resolution, in complex with ribavirin monophosphate and phosphonic acidmono-[2-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1,3-dihydro-isobenzofuran-5-yl)-ethyl] ester at 2.65 resolution, in complex with with 6-chloropurine riboside 5'-monophosphate and NAD+ at 2.9 A resolution Homo sapiens

Inhibitors

Inhibitors Comment Organism Structure
benzamide riboside inhibitory activity is higher than tiazofurin and lower than selenazofurin; inhibitory activity is higher than tiazofurin and lower than selenazofurin Homo sapiens
beta-methylene-thiazole-4-carboxyamide-adenine dinucleotide
-
Tritrichomonas suis
BMS-337197 is a potent IMPDH inhibitor, shows in vivo activity for inhibition of antibody production in mice Mus musculus
BMS-337197 is a potent IMPDH inhibitor, shows in vivo activity for inhibition of antibody production in the adjuvant-induced arthritis model in rats Rattus norvegicus
Mycophenolic acid
-
Cricetulus griseus
Mycophenolic acid
-
Escherichia coli
Mycophenolic acid is a uncompetitive inhibitor of IMPDH with respect to both inosine 5'-phosphate and NAD+, inhibits IMPDH by trapping the covalent intermediate. It it is easily converted to mycophenolic acid-7-O-glucuronide, which limits the inhibitory efficacy and higher doses are therefore needed in order to maintain appropriate therapeutic levels; is a uncompetitive inhibitor of IMPDH with respect to both inosine 5'-phosphate and NAD+, inhibits IMPDH by trapping the covalent intermediate. It it is easily converted to mycophenolic acid-7-O-glucuronide, which limits the inhibitory efficacy and higher doses are therefore needed in order to maintain appropriate therapeutic levels Homo sapiens
Mycophenolic acid
-
Leishmania donovani
Mycophenolic acid
-
Tritrichomonas suis
NAD+
-
Tritrichomonas suis
ribavirin monophosphate
-
Homo sapiens
ribavirin monophosphate
-
Mycobacterium tuberculosis
Selenazofurin
-
Homo sapiens
selenazole-4-carboxyamide-adenine dinucleotide
-
Homo sapiens
tiazofurin
-
Homo sapiens
VX-148
-
Homo sapiens
VX-497
-
Homo sapiens

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
56000
-
4 * 56000 Homo sapiens

Organism

Organism UniProt Comment Textmining
Borreliella burgdorferi
-
-
-
Cricetulus griseus
-
chinese hamster
-
Escherichia coli
-
-
-
Homo sapiens P12268
-
-
Homo sapiens P20839
-
-
Leishmania donovani
-
-
-
Mus musculus
-
-
-
Mycobacterium tuberculosis
-
strains CDC1551 and H37Rv
-
Pyrococcus horikoshii OT3
-
-
-
Rattus norvegicus
-
-
-
Streptococcus pyogenes
-
-
-
Thermotoga maritima
-
-
-
Tritrichomonas suis
-
-
-

Source Tissue

Source Tissue Comment Organism Textmining
carcinoma cell
-
Homo sapiens
-
carcinoma cell type II isoform predominates Homo sapiens
-
K-562 cell
-
Homo sapiens
-
leukocyte
-
Homo sapiens
-
leukocyte type I isoform is prevalent Homo sapiens
-
lymphocyte
-
Homo sapiens
-
lymphocyte type I isoform is prevalent Homo sapiens
-
additional information type II isoform predominates in proliferating cells and is upregulated in neoplastic cells Homo sapiens
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
inosine 5'-phosphate + NAD+ + H2O
-
Homo sapiens xanthosine 5'-phosphate + NADH
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Cricetulus griseus xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Mus musculus xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Escherichia coli xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Rattus norvegicus xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Streptococcus pyogenes xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Mycobacterium tuberculosis xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Leishmania donovani xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Thermotoga maritima xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Tritrichomonas suis xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Borreliella burgdorferi xanthosine 5'-phosphate + NADH + H+
-
?
inosine 5'-phosphate + NAD+ + H2O
-
Pyrococcus horikoshii OT3 xanthosine 5'-phosphate + NADH + H+
-
?

Subunits

Subunits Comment Organism
tetramer 4 * 56000 Homo sapiens

Synonyms

Synonyms Comment Organism
IMPDH
-
Cricetulus griseus
IMPDH
-
Mus musculus
IMPDH
-
Escherichia coli
IMPDH
-
Rattus norvegicus
IMPDH
-
Streptococcus pyogenes
IMPDH
-
Mycobacterium tuberculosis
IMPDH
-
Leishmania donovani
IMPDH
-
Thermotoga maritima
IMPDH
-
Tritrichomonas suis
IMPDH
-
Borreliella burgdorferi
IMPDH
-
Pyrococcus horikoshii OT3
IMPDH
-
Homo sapiens
inosine monophosphate dehydrogenase
-
Cricetulus griseus
inosine monophosphate dehydrogenase
-
Mus musculus
inosine monophosphate dehydrogenase
-
Escherichia coli
inosine monophosphate dehydrogenase
-
Rattus norvegicus
inosine monophosphate dehydrogenase
-
Streptococcus pyogenes
inosine monophosphate dehydrogenase
-
Mycobacterium tuberculosis
inosine monophosphate dehydrogenase
-
Leishmania donovani
inosine monophosphate dehydrogenase
-
Thermotoga maritima
inosine monophosphate dehydrogenase
-
Tritrichomonas suis
inosine monophosphate dehydrogenase
-
Borreliella burgdorferi
inosine monophosphate dehydrogenase
-
Pyrococcus horikoshii OT3
inosine monophosphate dehydrogenase
-
Homo sapiens

Cofactor

Cofactor Comment Organism Structure
NAD+
-
Mycobacterium tuberculosis
NAD+ dependent on Cricetulus griseus
NAD+ dependent on Mus musculus
NAD+ dependent on Escherichia coli
NAD+ dependent on Rattus norvegicus
NAD+ dependent on Streptococcus pyogenes
NAD+ dependent on Leishmania donovani
NAD+ dependent on Thermotoga maritima
NAD+ dependent on Tritrichomonas suis
NAD+ dependent on Borreliella burgdorferi
NAD+ dependent on Pyrococcus horikoshii OT3
NAD+ dependent on Homo sapiens

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
0.0000002
-
Mycophenolic acid
-
Leishmania donovani
0.000007
-
Mycophenolic acid against type II isoform Homo sapiens
0.000007
-
VX-497 type I isoform Homo sapiens
0.000009
-
Mycophenolic acid
-
Tritrichomonas suis
0.00001
-
VX-497 against type II isoform Homo sapiens
0.00002
-
Mycophenolic acid
-
Escherichia coli
0.00002
-
Mycophenolic acid against IMPDH in general Homo sapiens
0.000033
-
Mycophenolic acid type I isoform Homo sapiens

General Information

General Information Comment Organism
physiological function is a key enzyme in the biosynthesis of purine nucleotides Cricetulus griseus
physiological function is a key enzyme in the biosynthesis of purine nucleotides Escherichia coli
physiological function is a key enzyme in the biosynthesis of purine nucleotides Rattus norvegicus
physiological function is a key enzyme in the biosynthesis of purine nucleotides Streptococcus pyogenes
physiological function is a key enzyme in the biosynthesis of purine nucleotides Leishmania donovani
physiological function is a key enzyme in the biosynthesis of purine nucleotides Thermotoga maritima
physiological function is a key enzyme in the biosynthesis of purine nucleotides Tritrichomonas suis
physiological function is a key enzyme in the biosynthesis of purine nucleotides Borreliella burgdorferi
physiological function is a key enzyme in the biosynthesis of purine nucleotides Pyrococcus horikoshii OT3
physiological function is a key enzyme in the biosynthesis of purine nucleotides Homo sapiens
physiological function is a key enzyme in the biosynthesis of purine nucleotides. Loss of both alleles of the type 2 gene results in very early embryonic lethality. Type I enzymatic activity appears not to be essential for normal mouse development or fertility Mus musculus
physiological function is a key enzyme in the biosynthesis of purine nucleotides. Mutations in the type I gene cause the RP10 form of autosomal dominant retinitis pigmentosa Homo sapiens