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Literature summary for 1.4.99.2 extracted from

  • Bruggemann, C.; Denger, K.; Cook, A.M.; Ruff, J.
    Enzymes and genes of taurine and isethionate dissimilation in Paracoccus denitrificans (2004), Microbiology, 150, 805-816.
    View publication on PubMed
Search for more literature for 1.4.99.2

Activating Compound

Activating Compound Comment Organism Structure
additional information enzyme is inducible by taurine Sinorhizobium meliloti
additional information enzyme is inducible by taurine Paracoccus denitrificans
additional information enzyme is inducible by taurine Paracoccus pantotrophus

Cloned(Commentary)

Cloned (Comment) Organism
enzyme might be encoded by genes tauX and tauY, gene cluster DNA and sequence determination and analysis, gene cluster organization Paracoccus denitrificans
gene tauY, DNA and sequence determination and analysis Ralstonia sp.
genes tauX and tauY, gene cluster DNA and sequence determination and analysis, gene cluster organization Burkholderia sp.
genes tauX and tauY, gene cluster DNA and sequence determination and analysis, gene cluster organization Paracoccus pantotrophus
genes tauXY, gene cluster DNA and sequence determination and analysis, gene cluster organization Sinorhizobium meliloti

Localization

Localization Comment Organism GeneOntology No. Textmining
membrane
-
 Paracoccus denitrificans 16020
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
taurine + H2O + cytochrome c Sinorhizobium meliloti enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Burkholderia sp. enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Paracoccus pantotrophus enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Paracoccus denitrificans enzyme is encoded within the gene cluster, comprising 9 genes, of the taurine dissimilation pathway, overview sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Ralstonia sp. enzyme is involved in taurine dissimilation sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Ralstonia sp. EDS1 / DSM 13640 enzyme is involved in taurine dissimilation sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Paracoccus denitrificans NKNIS / DSM 15418 enzyme is encoded within the gene cluster, comprising 9 genes, of the taurine dissimilation pathway, overview sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Paracoccus pantotrophus NKNCYSA / DSM 12449 enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Sinorhizobium meliloti Rm1021 enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Ralstonia sp. SFCD1 / DSM 15091 enzyme is involved in taurine dissimilation sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c Burkholderia sp. LB400 enzyme is encoded within a gene cluster sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?

Organism

Organism UniProt Comment Textmining
Burkholderia sp.
-
-
-
Burkholderia sp. LB400
-
-
-
no activity in Castellaniella defragrans
-
-
-
no activity in Castellaniella defragrans NKNTAU / DSM 11046
-
-
-
Paracoccus denitrificans Q6RH61 large subunit
-
Paracoccus denitrificans Q6RH62 small subunit
-
Paracoccus denitrificans NKNIS / DSM 15418 Q6RH61 large subunit
-
Paracoccus denitrificans NKNIS / DSM 15418 Q6RH62 small subunit
-
Paracoccus pantotrophus Q6RH44 large subunit
-
Paracoccus pantotrophus Q6RH45 small subunit
-
Paracoccus pantotrophus Q6RH47 small subunit; strain DSM65
-
Paracoccus pantotrophus Q6RH53 large subunit; strain DSM65
-
Paracoccus pantotrophus DSM 65 Q6RH47 small subunit; strain DSM65
-
Paracoccus pantotrophus DSM 65 Q6RH53 large subunit; strain DSM65
-
Paracoccus pantotrophus NKNCYSA / DSM 12449 Q6RH44 large subunit
-
Paracoccus pantotrophus NKNCYSA / DSM 12449 Q6RH45 small subunit
-
Ralstonia sp. Q6RH40 large subunit
-
Ralstonia sp. Q6RH40 partial gene tauY
-
Ralstonia sp. EDS1 / DSM 13640 Q6RH40 large subunit
-
Ralstonia sp. SFCD1 / DSM 15091 Q6RH40 partial gene tauY
-
Sinorhizobium meliloti
-
 gene tauXY
-
Sinorhizobium meliloti Rm1021
-
 gene tauXY
-

Source Tissue

Source Tissue Comment Organism Textmining
culture condition:taurine-grown cell inducible enzyme, organism can grow on taurine as sole carbon source Paracoccus denitrificans
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
0.02
-
-
 Burkholderia sp.
0.04
-
-
 Sinorhizobium meliloti
0.42
-
-
 Paracoccus pantotrophus
0.44
-
 purified enzyme Paracoccus denitrificans
1.5
-
 membrane fraction Paracoccus denitrificans

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information no activity with FAD, FMN, riboflavin, PQQ, 1,4-naphthoquinone, ubiquinone, menadione, and K3Fe(CN)6 as acceptors Paracoccus denitrificans ?
-
 ?
additional information no activity with FAD, FMN, riboflavin, PQQ, 1,4-naphthoquinone, ubiquinone, menadione, and K3Fe(CN)6 as acceptors Paracoccus denitrificans NKNIS / DSM 15418 ?
-
 ?
taurine + H2O + 2,6-dichlorophenol indophenol
-
 Paracoccus denitrificans sulfoacetaldehyde + NH3 + reduced 2,6-dichlorophenol indophenol
-
 ?
taurine + H2O + 2,6-dichlorophenol indophenol
-
 Paracoccus denitrificans NKNIS / DSM 15418 sulfoacetaldehyde + NH3 + reduced 2,6-dichlorophenol indophenol
-
 ?
taurine + H2O + cytochrome c
-
 Burkholderia sp. sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Paracoccus pantotrophus sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Ralstonia sp. sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Sinorhizobium meliloti sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Burkholderia sp. sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Paracoccus pantotrophus sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within the gene cluster, comprising 9 genes, of the taurine dissimilation pathway, overview Paracoccus denitrificans sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is involved in taurine dissimilation Ralstonia sp. sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c specific for taurine, no activity with isethionate and acetate Sinorhizobium meliloti sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c specific for taurine, no activity with isethionate and acetate Paracoccus denitrificans sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Ralstonia sp. EDS1 / DSM 13640 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is involved in taurine dissimilation Ralstonia sp. EDS1 / DSM 13640 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within the gene cluster, comprising 9 genes, of the taurine dissimilation pathway, overview Paracoccus denitrificans NKNIS / DSM 15418 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c specific for taurine, no activity with isethionate and acetate Paracoccus denitrificans NKNIS / DSM 15418 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Paracoccus pantotrophus NKNCYSA / DSM 12449 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Sinorhizobium meliloti Rm1021 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c specific for taurine, no activity with isethionate and acetate Sinorhizobium meliloti Rm1021 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Paracoccus pantotrophus DSM 65 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Ralstonia sp. SFCD1 / DSM 15091 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is involved in taurine dissimilation Ralstonia sp. SFCD1 / DSM 15091 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c
-
 Burkholderia sp. LB400 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?
taurine + H2O + cytochrome c enzyme is encoded within a gene cluster Burkholderia sp. LB400 sulfoacetaldehyde + NH3 + reduced cytochrome c
-
 ?

Subunits

Subunits Comment Organism
? 2 inducible proteins of MW 14 and 50 kDa detected in the particulate fraction Paracoccus denitrificans

Synonyms

Synonyms Comment Organism
TauXY
-
 Paracoccus denitrificans
TDH
-
 Sinorhizobium meliloti
TDH
-
 Burkholderia sp.
TDH
-
 Paracoccus denitrificans
TDH
-
 Paracoccus pantotrophus
TDH
-
 Ralstonia sp.

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
9
-
 optimized assay with beef heart cytochrome c as acceptor Paracoccus denitrificans

pH Range

pH Minimum pH Maximum Comment Organism
7.2 9
-
 Paracoccus denitrificans