Reference on EC 1.7.2.4 - nitrous-oxide reductase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Haltia, T.; Brown, K.; Tegoni, M.; Gambillau, C.; Saraste, M.; Mattila, K.; Djinovic-Carugo, K.
The crystal structure of nitrous oxide reductase from Paracoccus denitrificans at 1.6 A resolution
Biochem. J.
369
77-88
2003
Paracoccus denitrificans
Manually annotated by BRENDA team
Rasmussen, T.; Berks, B.C.; Butt, J.N.; Thomson, A.J.
Multiple forms of the catalytic centre, Cuz, in the enzyme nitrous oxide reductase from Paracoccus pantotrophus
Biochem. J.
364
807-815
2002
Paracoccus pantotrophus
Manually annotated by BRENDA team
Rasmussen, T.; Berks, B.C.; Sanders-Loehr, J.; Dooley, D.M.; Zumft, W.G.; Thomson, A.J.
The catalytic center in nitrous oxide reductase, CuZ, is a copper-sulfide cluster
Biochemistry
39
12753-12756
2000
Paracoccus pantotrophus, Pseudomonas stutzeri
Manually annotated by BRENDA team
Prudencio, M.; Pereira, A.S.; Tavares, P.; Besson, S.; Cabrito, I.; Brown, K.; Samyn, B.; Devreese, B.; Van Beeumen, J.; Rusnak, F.; Fauque, G.; Moura, J.J.G.; Tegoni, M.; Cambillau, C.; Moura, I.
Purification, Characterization, and Preliminary Crystallographic Study of Copper-Containing Nitrous Oxide Reductase from Pseudomonas nautica 617
Biochemistry
39
3899-3907
2000
Marinobacter hydrocarbonoclasticus, Marinobacter hydrocarbonoclasticus 617
Manually annotated by BRENDA team
Brown, K.; Tegoni, M.; Prudencio, M.; Pereira, A.S.; Besson, S.; Moura, J.J.; Moura, I.; Cambillau, C.
A novel type of catalytic copper cluster in nitrous oxide reductase
Nat. Struct. Biol.
7
191-195
2000
Marinobacter hydrocarbonoclasticus, Marinobacter hydrocarbonoclasticus 617
Manually annotated by BRENDA team
Sato, K.; Okubo, A.; Yamazaki, S.
Anaerobic purification and characterization of nitrous oxide reductase from Rhodobacter sphaeroides f. sp. denitrificans IL106
J. Biochem.
125
864-868
1999
Rhodobacter sphaeroides
Manually annotated by BRENDA team
Sabaty, M.; Schwintner, C.; Cahors, S.; Richaud, P.; Vermeglio, A.
Nitrite and nitrous oxide reductase regulation by nitrogen oxides in Rhodobacter sphaeroides f. sp. denitrificans IL106
J. Bacteriol.
181
6028-6032
1999
Rhodobacter sphaeroides
Manually annotated by BRENDA team
Ferretti, S.; Grossmann, J.G.; Hasnain, S.S.; Eady, R.R.; Smith, B.E.
Biochemical characterization and solution structure of nitrous oxide reductase from Alcaligenes xylosoxidans (NCIMB 11015)
Eur. J. Biochem.
259
651-659
1999
Achromobacter xylosoxidans
Manually annotated by BRENDA team
Sato, K.; Okubo, A.; Yamazaki, S.
Characterization of a multi-copper enzyme, nitrous oxide reductase, from Rhodobacter sphaeroides f. sp. denitrificans
J. Biochem.
124
51-54
1998
Rhodobacter sphaeroides
Manually annotated by BRENDA team
Farrar, J.A.; Zumft, W.G.; Thomson, A.J.
CuA and CuZ are variants of the electron transfer center in nitrous oxide reductase
Proc. Natl. Acad. Sci. USA
95
9891-9896
1998
Pseudomonas stutzeri
Manually annotated by BRENDA team
Hole, U.H.; Vollack, K.U.; Zumft, W.G.; Eisenmann, E.; Siddiqui, R.A.; Friedrich, B.; Kroneck, P.M.H.
Characterization of the membranous denitrification enzymes nitrite reductase (cytochrome cd1) and copper-containing nitrous oxide reductase from Thiobacillus denitrificans
Arch. Microbiol.
165
55-61
1996
Thiobacillus denitrificans
Manually annotated by BRENDA team
Dreusch, A.; Riester, J.; Kroneck, P.M.; Zumft, W.G.
Mutation of the conserved Cys165 outside of the CuA domain destabilizes nitrous oxide reductase but maintains its catalytic activity. Evidence for disulfide bridges and a putative protein disulfide isomerase gene
Eur. J. Biochem.
237
447-453
1996
Pseudomonas stutzeri
Manually annotated by BRENDA team
Zhang, C.s.; Hollocher, T.C.
The reaction of reduced cytochromes c with nitrous oxide reductase of Wolinella succinogenes
Biochim. Biophys. Acta
1142
253-261
1993
Wolinella succinogenes
-
Manually annotated by BRENDA team
Berks, B.C.; Baratta, D.; Richardson, D.J.; Ferguson, S.J.
Purification and characterization of a nitrous oxide reductase from Thiosphaera pantotropha. Implications for the mechanism of aerobic nitrous oxide reduction
Eur. J. Biochem.
212
467-476
1993
Paracoccus pantotrophus, Paracoccus pantotrophus LMD 82.5
Manually annotated by BRENDA team
Jones, A.M.; Knowles, R.
Denitrification in Flexibacter canadensis
Can. J. Microbiol.
36
430-434
1990
Solitalea canadensis
-
Manually annotated by BRENDA team
Hulse, C.L.; Averill, B.A.
Isolation of a high specific activity pink, monomeric nitrous oxide reductase from Achromobacter cycloclastes
Biochem. Biophys. Res. Commun.
166
729-735
1990
Achromobacter cycloclastes
Manually annotated by BRENDA team
Bonin, P.; Gilewicz, M.; Bertrand, J.C.
Effects of oxygen on each step of denitrification on Pseudomonas nautica
Can. J. Microbiol.
35
1061-1064
1989
Marinobacter hydrocarbonoclasticus
-
Manually annotated by BRENDA team
Teraguchi, S.; Hollocher, T.C.
Purification and some characteristics of a cytochrome c-containing nitrous oxide reductase from Wolinella succinogenes
J. Biol. Chem.
264
1972-1979
1989
Wolinella succinogenes
Manually annotated by BRENDA team
Viebrock, A.; Zumft, W.G.
Molecular cloning, heterologous expression, and primary structure of the structural gene for the copper enzyme nitrous oxide reductase from denitrifying Pseudomonas stutzeri
J. Bacteriol.
170
4658-4668
1988
Pseudomonas stutzeri
Manually annotated by BRENDA team
Coyne, M.S.; Focht, D.D.
Nitrous oxide reduction in nodules: denitrification or N2 fixation ?
Appl. Environ. Microbiol.
53
1168-1170
1987
Rhizobium sp., Rhizobium sp. 8A55
Manually annotated by BRENDA team
Snyder, S.W.; Hollocher, T.G.
Purification and some characteristics of nitrous oxide reductase from Paracoccus denitrificans
J. Biol. Chem.
262
6515-6525
1987
Paracoccus denitrificans
Manually annotated by BRENDA team
Kucera, I.; Boublikova, P.; Dadak, V.
Amperometric assay of activity and pH-optimum of N2O-reductase of Paracoccus denitrificans
Collect. Czech. Chem. Commun.
49
2709-2712
1984
Paracoccus denitrificans
-
Manually annotated by BRENDA team
Michalski, W.P.; Hein, D.H.; Nicholas, D.J.D.
Purification and characterization of nitrous oxide reductase from Rhodopseudomonas sphaeroides f.sp. denitrificans
Biochim. Biophys. Acta
872
50-60
1986
Rhodobacter sphaeroides
-
Manually annotated by BRENDA team
Coyle, C.L.; Zumft, W.G.; Kroneck, P.M.H.; Körner, H.; Jakob, W.
Nitrous oxide reductase from denitrifying Pseudomonas perfectomarina. Purification and properties of a novel multicopper enzyme
Eur. J. Biochem.
153
459-467
1985
Pseudomonas stutzeri
Manually annotated by BRENDA team
McEwan, A.G.; Greenfield, A.J.; Wetzstein, H.G.; Jackson, J.B.; Ferguson, S.J.
Nitrous oxide reduction by members of the family Rhodospirillaceae and the nitrous oxide reductase of Rhodopseudomonas capsulata
J. Bacteriol.
164
823-830
1985
Rhodobacter capsulatus, Rhodobacter sphaeroides, Rhodopseudomonas palustris, Rhodopseudomonas palustris PW5, Rhodospirillum rubrum, Rhodospirillum rubrum S1
Manually annotated by BRENDA team
Snyder, S.W.; Hollocher, T.C.
Nitrous oxide reductase and the 120,000 MW copper protein of N2-producing denitrifying bacteria are different entities
Biochem. Biophys. Res. Commun.
119
588-592
1984
Paracoccus denitrificans, Pseudomonas denitrificans (nomen rejiciendum), Pseudomonas stutzeri
Manually annotated by BRENDA team
Aida, T.; Hata, S.; Kusunoki, H.
Temporary low oxygen conditions for the formation of nitrate reductase and nitrous oxide reductase by denitrifying Pseudomonas sp. G59
Can. J. Microbiol.
32
543-547
1986
Pseudomonas sp., Pseudomonas sp. G59
Manually annotated by BRENDA team
Zumft, W.G.; Matsubara, T.
A novel kind of multi-copper protein as terminal oxidoreductase of nitrous oxide respiration in Pseudomonas perfectomarinus
FEBS Lett.
148
107-112
1982
Pseudomonas stutzeri
-
Manually annotated by BRENDA team
Matsubara, T.; Zumft, W.G.
Identification of a copper protein as part of the nitrous oxide-reducing system in nitrite-respiring (denitrifying) Pseudomonads
Arch. Microbiol.
132
322-328
1982
Pseudomonas fluorescens
-
Manually annotated by BRENDA team
Kristjansson, J.K.; Hollocher, T.C.
Partial purification and characterization of nitrous oxide reductase from Paracoccus denitrificans
Curr. Microbiol.
6
247-251
1981
Paracoccus denitrificans
-
Manually annotated by BRENDA team
Kristjansson, J.K.; Hollocher, T.C.
First practical assay for soluble nitrous oxide reductase of denitrifying bacteria and a partial kinetic characterization
J. Biol. Chem.
255
704-707
1980
Paracoccus denitrificans
Manually annotated by BRENDA team
Velasco, L.; Mesa, S.; Xu, C.A.; Delgado, M.J.; Bedmar, E.J.
Molecular characterization of nosRZDFYLX genes coding for denitrifying nitrous oxide reductase of Bradyrhizobium japonicum
Antonie van Leeuwenhoek
85
229-235
2004
Bradyrhizobium japonicum, Bradyrhizobium japonicum (Q89XJ6)
Manually annotated by BRENDA team
Chan, J.M.; Bollinger, J.A.; Grewell, C.L.; Dooley, D.M.
Reductively activated nitrous oxide reductase reacts directly with Substrate
J. Am. Chem. Soc.
126
3030-3031
2004
Achromobacter cycloclastes
Manually annotated by BRENDA team
Yamaguchi, K.; Kawamura, A.; Ogawa, H.; Suzuki, S.
Characterization of nitrous oxide reductase from a methylotrophic denitrifying bacterium, Hyphomicrobium denitrificans A3151
J. Biochem.
134
853-858
2003
Hyphomicrobium denitrificans, Hyphomicrobium denitrificans A3151
Manually annotated by BRENDA team
Arai, H.; Mizutani, M.; Igarashi, Y.
Transcriptional regulation of the nos genes for nitrous oxide reductase in Pseudomonas aeruginosa
Microbiology
149
29-36
2003
Pseudomonas aeruginosa
Manually annotated by BRENDA team
Mattila, K.; Haltia, T.
How does nitrous oxide reductase interact with its electron donors?--A docking study
Proteins
59
708-722
2005
Paracoccus denitrificans (Q51705), Rhodobacter sphaeroides
Manually annotated by BRENDA team
SooHoo, C.K.; Hollocher, T.C.
Purification and characterization of nitrous oxide reductase from Pseudomonas aeruginosa strain P2
J. Biol. Chem.
266
2203-2209
1991
Pseudomonas aeruginosa, Pseudomonas aeruginosa P2
Manually annotated by BRENDA team
Horn, M.A.; Drake, H.L.; Schramm, A.
Nitrous oxide reductase genes (nosZ) of denitrifying microbial populations in soil and the earthworm gut are phylogenetically similar
Appl. Environ. Microbiol.
72
1019-1026
2006
Dechloromonas denitrificans, Flavobacterium denitrificans, Pseudomonas sp., Pseudomonas sp. ED3
Manually annotated by BRENDA team
Sameshima-Saito, R.; Chiba, K.; Hirayama, J.; Itakura, M.; Mitsui, H.; Eda, S.; Minamisawa, K.
Symbiotic Bradyrhizobium japonicum reduces N2O surrounding the soybean root system via nitrous oxide reductase
Appl. Environ. Microbiol.
72
2526-2532
2006
Bradyrhizobium japonicum, Bradyrhizobium japonicum USDA 110
Manually annotated by BRENDA team
Henry, S.; Bru, D.; Stres, B.; Hallet, S.; Philippot, L.
Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils
Appl. Environ. Microbiol.
72
5181-5189
2006
Achromobacter cycloclastes, Alcaligenes faecalis, Bradyrhizobium japonicum, Ensifer adhaerens, Ensifer adhaerens SN611, Hyphomicrobium denitrificans, Pseudomonas denitrificans (nomen rejiciendum), Pseudomonas denitrificans (nomen rejiciendum) CCUG 2519, Pseudomonas fluorescens (Q9F0W4), Pseudomonas fluorescens C7R12 (Q9F0W4), Sinorhizobium meliloti, Sinorhizobium meliloti 50
Manually annotated by BRENDA team
Taubner, L.M.; McGuirl, M.A.; Dooley, D.M.; Copie, V.
Structural studies of Apo NosL, an accessory protein of the nitrous oxide reductase system: insights from structural homology with MerB, a mercury resistance protein
Biochemistry
45
12240-12252
2006
Achromobacter cycloclastes
Manually annotated by BRENDA team
Rasmussen, T.; Brittain, T.; Berks, B.C.; Watmough, N.J.; Thomson, A.J.
Formation of a cytochrome c-nitrous oxide reductase complex is obligatory for N2O reduction by Paracoccus pantotrophus
Dalton Trans.
2005
3501-3506
2005
Paracoccus pantotrophus
Manually annotated by BRENDA team
Wunsch, P.; Koerner, H.; Neese, F.; van Spanning, R.J.; Kroneck, P.M.; Zumft, W.G.
NosX function connects to nitrous oxide (N2O) reduction by affecting the Cu(Z) center of NosZ and its activity in vivo
FEBS Lett.
579
4605-4609
2005
Paracoccus denitrificans
Manually annotated by BRENDA team
Gorelsky, S.I.; Ghosh, S.; Solomon, E.I.
Mechanism of N2O reduction by the mu4-S tetranuclear CuZ cluster of nitrous oxide reductase
J. Am. Chem. Soc.
128
278-290
2006
Pseudomonas sp.
Manually annotated by BRENDA team
Paraskevopoulos, K.; Antonyuk, S.V.; Sawers, R.G.; Eady, R.R.; Hasnain, S.S.
Insight into catalysis of nitrous oxide reductase from high-resolution structures of resting and inhibitor-bound enzyme from Achromobacter cycloclastes
J. Mol. Biol.
362
55-65
2006
Achromobacter cycloclastes 1013 (P94127), Achromobacter cycloclastes, Achromobacter cycloclastes (P94127)
Manually annotated by BRENDA team
Fujita, K.; Dooley, D.M.
Insights into the mechanism of N2O reduction by reductively activated N2O reductase from kinetics and spectroscopic studies of pH effects
Inorg. Chem.
46
613-615
2007
Achromobacter cycloclastes, Achromobacter cycloclastes (P94127)
Manually annotated by BRENDA team
Ghosh, S.; Gorelsky, S.I.; George, S.D.; Chan, J.M.; Cabrito, I.; Dooley, D.M.; Moura, J.J.; Moura, I.; Solomon, E.I.
Spectroscopic, computational, and kinetic studies of the mu4-sulfide-bridged tetranuclear CuZ cluster in N2O reductase: pH effect on the edge ligand and its contribution to reactivity
J. Am. Chem. Soc.
129
3955-3965
2007
Achromobacter cycloclastes, Achromobacter cycloclastes (P94127), Marinobacter hydrocarbonoclasticus, Marinobacter hydrocarbonoclasticus (Q19Q69)
Manually annotated by BRENDA team
Fujita, K.; Chan, J.M.; Bollinger, J.A.; Alvarez, M.L.; Dooley, D.M.
Anaerobic purification, characterization and preliminary mechanistic study of recombinant nitrous oxide reductase from Achromobacter cycloclastes
J. Inorg. Biochem.
101
1836-1844
2007
Achromobacter cycloclastes, Achromobacter cycloclastes (P94127), Achromobacter cycloclastes IAM1013 (P94127)
Manually annotated by BRENDA team
Bingham, S.J.; Rasmussen, T.; Farrar, J.; Wolverson, D.; Thomson, A.J.
Magnetic circular dichroism anisotropy of the CuA centre of nitrous oxide reductase from coherent Raman detected electron spin resonance spectroscopy
Mol. Phys.
105
2169-2176
2007
Paracoccus pantotrophus
-
Manually annotated by BRENDA team
Savelieff, M.G.; Wilson, T.D.; Elias, Y.; Nilges, M.J.; Garner, D.K.; Lu, Y.
Experimental evidence for a link among cupredoxins: red, blue, and purple copper transformations in nitrous oxide reductase
Proc. Natl. Acad. Sci. USA
105
7919-7924
2008
Paracoccus denitrificans, Paracoccus denitrificans (Q51705)
Manually annotated by BRENDA team
Fernandes, A.T.; Damas, J.M.; Todorovic, S.; Huber, R.; Baratto, M.C.; Pogni, R.; Soares, C.M.; Martins, L.O.
The multicopper oxidase from the archaeon Pyrobaculum aerophilum shows nitrous oxide reductase activity
FEBS J.
277
3176-3189
2010
Pyrobaculum aerophilum
Manually annotated by BRENDA team
Ertem, M.Z.; Cramer, C.J.; Himo, F.; Siegbahn, P.E.
N-O bond cleavage mechanism(s) in nitrous oxide reductase
J. Biol. Inorg. Chem.
17
687-698
2012
Paracoccus denitrificans (Q51705)
Manually annotated by BRENDA team
Fujita, K.; Hirasawa-Fujita, M.; Brown, D.E.; Obara, Y.; Ijima, F.; Kohzuma, T.; Dooley, D.M.
Direct electron transfer from pseudoazurin to nitrous oxide reductase in catalytic N2O reduction
J. Inorg. Biochem.
115
163-173
2012
Achromobacter cycloclastes, Achromobacter cycloclastes (P94127)
Manually annotated by BRENDA team
DellAcqua, S.; Pauleta, S.; Moura, J.; Moura, I.
Biochemical characterization of the purple form of Marinobacter hydrocarbonoclasticus nitrous oxide reductase
Philos. Trans. R. Soc. Lond. B Biol. Sci.
367
1204-1212
2012
Marinobacter hydrocarbonoclasticus
Manually annotated by BRENDA team
Wan, S.; Mottiar, Y.; Johnson, A.M.; Goto, K.; Altosaar, I.
Expression of the nos operon proteins from Pseudomonas stutzeri in transgenic plants to assemble nitrous oxide reductase
Transgenic Res.
21
593-603
2012
Pseudomonas stutzeri (P19573), Pseudomonas stutzeri, Pseudomonas stutzeri ATCC 14405 (P19573)
Manually annotated by BRENDA team
Wyman, M.; Hodgson, S.; Bird, C.
Denitrifying alphaproteobacteria from the Arabian Sea that express nosZ, the gene encoding nitrous oxide reductase, in oxic and suboxic waters
Appl. Environ. Microbiol.
79
2670-2681
2013
alpha proteobacterium 4N (H9A6G9), Trichodesmium erythraeum, Trichodesmium erythraeum IMS01, uncultured Alphaproteobacteria bacterium (M1QGM4)
Manually annotated by BRENDA team
Zhang, L.; Zeng, G.; Zhang, J.; Chen, Y.; Yu, M.; Lu, L.; Li, H.; Zhu, Y.; Yuan, Y.; Huang, A.; He, L.
Response of denitrifying genes coding for nitrite (nirK or nirS) and nitrous oxide (nosZ) reductases to different physico-chemical parameters during agricultural waste composting
Appl. Microbiol. Biotechnol.
99
4059-4070
2015
uncultured bacterium
Manually annotated by BRENDA team
Schneider, L.K.; Einsle, O.
Role of calcium in secondary structure stabilization during maturation of nitrous oxide reductase
Biochemistry
55
1433-1440
2016
Shewanella denitrificans (Q12M27), Shewanella denitrificans, Shewanella denitrificans OS217 (Q12M27)
Manually annotated by BRENDA team
Johnston, E.M.; DellAcqua, S.; Pauleta, S.R.; Moura, I.; Solomon, E.I.
Protonation state of the Cu4S2 CuZ site in nitrous oxide reductase redox dependence and insight into reactivity
Chem. Sci.
6
5670-5679
2015
Paracoccus pantotrophus, Pseudomonas stutzeri
Manually annotated by BRENDA team
Qu, Z.; Bakken, L.R.; Molstad, L.; Frostegard, A.; Bergaust, L.L.
Transcriptional and metabolic regulation of denitrification in Paracoccus denitrificans allows low but significant activity of nitrous oxide reductase under oxic conditions
Environ. Microbiol.
18
2951-2963
2016
Paracoccus denitrificans
Manually annotated by BRENDA team
Sanchez, C.; Mitsui, H.; Minamisawa, K.
Regulation of nitrous oxide reductase genes by NasT-mediated transcription antitermination in Bradyrhizobium diazoefficiens
Environ. Microbiol. Rep.
9
389-396
2017
Bradyrhizobium diazoefficiens, Bradyrhizobium diazoefficiens (Q89XJ6)
Manually annotated by BRENDA team
Johnston, E.M.; Carreira, C.; DellAcqua, S.; Dey, S.G.; Pauleta, S.R.; Moura, I.; Solomon, E.I.
Spectroscopic definition of the CuZ* intermediate in turnover of nitrous oxide reductase and molecular insight into the catalytic mechanism
J. Am. Chem. Soc.
139
4462-4476
2017
Marinobacter hydrocarbonoclasticus (Q19Q69), Marinobacter hydrocarbonoclasticus 617 (Q19Q69)
Manually annotated by BRENDA team