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Literature summary for 1.15.1.1 extracted from
- Molecular cloning, characterization and expression analysis of cytoplasmic Cu/Zn-superoxide dismutase (SOD) from pearl oyster Pinctada fucata (2013), Fish Shellfish Immunol., 34, 946-950.
Application
| Application | Comment | Organism |
|---|---|---|
| environmental protection | Cu/Zn superoxide dismutase might be used as a bioindicator of the aquatic environmental pollution and cellular stress in pearl oyster | Pinctada fucata |
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| DNA and amino acid sequence determination and analysis, phylogenetic analysis, semiquantitative PCR enzyme expression analysis | Pinctada fucata |
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| cytoplasm | - |
Pinctada fucata | 5737 | - |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Cu2+ | a Cu/Zn-superoxide dismutase | Pinctada fucata |  |
| Zn2+ | a Cu/Zn-superoxide dismutase | Pinctada fucata | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Pinctada fucata | I6TCY8 | from from the pearl farm in Tuticurin, south coast of India | - |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| adductor | - |
Pinctada fucata | - |
| digestive gland | - |
Pinctada fucata | - |
| gill | - |
Pinctada fucata | - |
| gonad | - |
Pinctada fucata | - |
| heart | - |
Pinctada fucata | - |
| hemocyte | - |
Pinctada fucata | - |
| mantle | - |
Pinctada fucata | - |
| additional information | the enzyme contains no N-terminal signal peptide. Tissue-specific semiquantitative PCR enzyme expression analysis, Pinctada fucata superoxide dismutase mRNA is abundantly expressed in hemocytes and gill and scarcely expressed in other tissues tested | Pinctada fucata | - |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| Cu/Zn-SOD | - |
Pinctada fucata |
| Cu/Zn-superoxide dismutase | - |
Pinctada fucata |
| SOD | - |
Pinctada fucata |
General Information
| General Information | Comment | Organism |
|---|---|---|
| evolution | two Cu/Zn superoxide dismutase family signature sequences exist in the deduced amino acid sequence of the superoxide dismutase: signature 1 consensus sequences [GA]-[IMFAT]-H-[LIVF]-H-{S}-x-[GP]-[SDG]-x-[STAGDE], and signature 2 consensus sequences G-[GNHD]-[SGA]-[GR]-x-R-x-[SGAWRV]-C-x(2)-[IV] | Pinctada fucata |
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