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Literature summary for 1.17.4.1 extracted from

  • Ogata, H.; Stolle, P.; Stehr, M.; Auling, G.; Lubitz, W.
    Crystallization and preliminary X-ray analysis of the small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes (2009), Acta Crystallogr. Sect. F, 65, 878-880.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
recombinant expression of R2F using expression vector pOCA2 Corynebacterium ammoniagenes

Crystallization (Commentary)

Crystallization (Comment) Organism
R2F, sitting drop vapour diffusion method, at 4°C, mixing 0.001 ml of RNR solution, containing mM KCl, 50 mM Tris–HCl, 2 mM DTT, 15% glycerol, pH 7.5, with 0.001 ml of reservoir buffer solution containing 0.1 M sodium citrate, 27.5% PEG 4000, 0.05 M ammonium acetate, pH 6.0, and 0.1 M ammonium acetate pH 7.0 with 0.05 MTris-HCl, pH 7.5, X-ray diffraction structure determination and analysis at 1.36 A resolution Corynebacterium ammoniagenes

Metals/Ions

Metals/Ions Comment Organism Structure
Mn2+ R2F is a mangagnese-containing enzyme Corynebacterium ammoniagenes
additional information R2F does not contain the metals Fe, Co, Ni and Cu Corynebacterium ammoniagenes

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Corynebacterium ammoniagenes ribonucleotide reduction is the unique step in DNA-precursor biosynthesis and involves radical-dependent redox chemistry and diverse metallo-cofactors, overview. The Mn-RNR from the Gram-positive bacterium Corynebacterium ammoniagenes, strain ATCC 6872, belongs a distinct RNR class IV enzyme ?
-
?

Organism

Organism UniProt Comment Textmining
Corynebacterium ammoniagenes
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strain ATCC 6872, gene nrdF
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Purification (Commentary)

Purification (Comment) Organism
recombinant R2F by anion exchange chromatography, gel filtration, and another different step of anion exchange chromatography to homogeneity Corynebacterium ammoniagenes

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information ribonucleotide reduction is the unique step in DNA-precursor biosynthesis and involves radical-dependent redox chemistry and diverse metallo-cofactors, overview. The Mn-RNR from the Gram-positive bacterium Corynebacterium ammoniagenes, strain ATCC 6872, belongs a distinct RNR class IV enzyme Corynebacterium ammoniagenes ?
-
?

Synonyms

Synonyms Comment Organism
Mn-RNR
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Corynebacterium ammoniagenes
R2F
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Corynebacterium ammoniagenes
ribonucleotide reductase
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Corynebacterium ammoniagenes