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Literature summary for 1.4.1.2 extracted from

  • Khan, M.I.; Ito, K.; Kim, H.; Ashida, H.; Ishikawa, T.; Shibata, H.; Sawa, Y.
    Molecular properties and enhancement of thermostability by random mutagenesis of glutamate dehydrogenase from Bacillus subtilis (2005), Biosci. Biotechnol. Biochem., 69, 1861-1870.
    View publication on PubMed

Application

Application Comment Organism
additional information Q144R can be used as a template gene to modify the substrate specificity of Bacillus subtilis GluDH for industrial use Bacillus subtilis

Cloned(Commentary)

Cloned (Comment) Organism
expression in Escherichia coli MV1184 Bacillus subtilis

Protein Variants

Protein Variants Comment Organism
E27F improved thermostability as compared to wild-type Bacillus subtilis
E27K slightly improved thermostability as compared to wild-type Bacillus subtilis
E27V slightly improved thermostability as compared to wild-type Bacillus subtilis
G255A no significant thermostability Bacillus subtilis
Q144C improved thermostability as compared to wild-type Bacillus subtilis
Q144D slightly improved thermostability as compared to wild-type Bacillus subtilis
Q144K no improved thermostability as compared to wild-type Bacillus subtilis
Q144R highly improved thermostability as compared to wild-type Bacillus subtilis
W100R no significant thermostability Bacillus subtilis

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.07
-
NADH wild-type Bacillus subtilis
0.08
-
NAD+ wild-type Bacillus subtilis
0.16
-
NADH mutant E27F Bacillus subtilis
0.34
-
L-glutamate wild-type Bacillus subtilis
0.41
-
NADH mutant Q144R Bacillus subtilis
0.65
-
2-oxoglutarate wild-type Bacillus subtilis
0.93
-
2-oxoglutarate mutant E27F Bacillus subtilis
1.22
-
2-oxoglutarate mutant Q144R Bacillus subtilis
52.3
-
NH4+ mutant E27F Bacillus subtilis
55.6
-
NH4+ wild-type Bacillus subtilis
56.8
-
NH4+ mutant Q144R Bacillus subtilis

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
46000
-
6 * 46000, SDS-PAGE, 6 * 46587, MALDI-MS, 6 * 46553, sequence analysis Bacillus subtilis
46553
-
6 * 46000, SDS-PAGE, 6 * 46587, MALDI-MS, 6 * 46553, sequence analysis Bacillus subtilis
46587
-
6 * 46000, SDS-PAGE, 6 * 46587, MALDI-MS, 6 * 46553, sequence analysis Bacillus subtilis
270000
-
gel filtration Bacillus subtilis

Organism

Organism UniProt Comment Textmining
Bacillus subtilis P39633 strain ISW1214
-
Bacillus subtilis 168 P39633 strain ISW1214
-

Purification (Commentary)

Purification (Comment) Organism
to homogeneity, about 39fold Bacillus subtilis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2-oxobutyrate + NADH + NH3 faint specificity Bacillus subtilis 2-aminobutyrate + NAD+ + H2O
-
?
2-oxobutyrate + NADH + NH3 faint specificity Bacillus subtilis 168 2-aminobutyrate + NAD+ + H2O
-
?
2-oxoglutarate + NADH + NH3
-
Bacillus subtilis L-glutamate + NAD+ + H2O
-
r
2-oxoglutarate + NADH + NH3
-
Bacillus subtilis 168 L-glutamate + NAD+ + H2O
-
r
2-oxoglutarate + NH4+ + NADPH
-
Bacillus subtilis L-glutamate + NADP+
-
?
additional information no activity with L-aspartate, L-alanine, L-valine and L-serine Bacillus subtilis ?
-
?
additional information no activity with L-aspartate, L-alanine, L-valine and L-serine Bacillus subtilis 168 ?
-
?
oxaloacetate + NADPH + NH3 faint specificity Bacillus subtilis L-aspartate + NADP+ + H2O
-
?
oxaloacetate + NADPH + NH3 faint specificity Bacillus subtilis 168 L-aspartate + NADP+ + H2O
-
?
pyruvate + NADPH + NH3 faint specificity Bacillus subtilis L-alanine + NADP+ + H2O
-
?
pyruvate + NADPH + NH3 faint specificity Bacillus subtilis 168 L-alanine + NADP+ + H2O
-
?

Subunits

Subunits Comment Organism
hexamer 6 * 46000, SDS-PAGE, 6 * 46587, MALDI-MS, 6 * 46553, sequence analysis Bacillus subtilis

Synonyms

Synonyms Comment Organism
GluDH
-
Bacillus subtilis
glutamate dehydrogenase
-
Bacillus subtilis

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
41
-
50% of its activity remains after incubation of the wild-type enzyme for 20 min Bacillus subtilis

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
18.1
-
L-glutamate wild-type Bacillus subtilis
342
-
2-oxoglutarate wild-type Bacillus subtilis
344
-
2-oxoglutarate mutant E27F Bacillus subtilis
435
-
2-oxoglutarate mutant Q144R, 1.3 times higher than that of the wild-type Bacillus subtilis

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.3
-
optimal for 2-oxoglutarate amination Bacillus subtilis
7.7
-
optimal for L-glutamate deamination Bacillus subtilis

pH Range

pH Minimum pH Maximum Comment Organism
6.9 8
-
Bacillus subtilis

Cofactor

Cofactor Comment Organism Structure
NADH does not prevent heat inactivation Bacillus subtilis