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Literature summary for 1.7.2.7 extracted from

  • Rasigraf, O.; Schmitt, J.; Jetten, M.S.M.; Lueke, C.
    Metagenomic potential for and diversity of N-cycle driving microorganisms in the Bothnian Sea sediment (2017), MicrobiologyOpen, 6, e475 .
    View publication on PubMedView publication on EuropePMC
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Cloned(Commentary)

Cloned (Comment) Organism
gene hzsA, cloned from the in situ microbial community in an oligotrophic, brackish environment of the Bothnian Sea sediment, DNA and amino acid sequence determination and analysis, sequence comparisons. The sequence shows high similarity to uncultured Scalindua spp. originating from the marine sediments in Guyamas Basin (AGV76990) uncultured bacterium

Organism

Organism UniProt Comment Textmining
uncultured bacterium
-
 from the in situ microbial community in an oligotrophic, brackish environment of the Bothnian Sea sediment
-

Synonyms

Synonyms Comment Organism
hzsA
-
 uncultured bacterium

General Information

General Information Comment Organism
evolution metagenomic analysis of diagnostic genes encoding key enzymes involved in the nitrogen cycle in in situ microbial community in an oligotrophic, brackish environment of the Bothnian Sea sediment, overview. Metagenome analysis reveals higher hzsA gene read abundance in sulfate methane transition zone (SMTZ, 2.4) than in oxic/anoxic interface zone (OAZ, 0.6). The hza sequences show high similarity to uncultured Scalindua spp. originating from the marine sediments in Guyamas Basin (AGV76990) uncultured bacterium