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Literature summary for 4.1.1.7 extracted from

  • Chakraborty, S.; Nemeria, N.S.; Balakrishnan, A.; Brandt, G.S.; Kneen, M.M.; Yep, A.; McLeish, M.J.; Kenyon, G.L.; Petsko, G.A.; Ringe, D.; Jordan, F.
    Detection and time course of formation of major thiamin diphosphate-bound covalent intermediates derived from a chromophoric substrate analogue on benzoylformate decarboxylase (2009), Biochemistry, 48, 981-994.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3)pLysS cells Pseudomonas putida

Crystallization (Commentary)

Crystallization (Comment) Organism
in complex with (E)-2-oxo-4(pyridin-3-yl)-3-butenoic acid or 3-(pyridin-3-yl)acrylaldehyde, hanging drop vapour diffusion method, in 100 mM TrisHCl (pH 8.5), 150 mM CaCl2, 0.5% (v/v) MPD [2-methyl-2,4-pentanediol], and 22% (v/v) PEG 400 Pseudomonas putida

Organism

Organism UniProt Comment Textmining
Pseudomonas putida P20906
-
-

Purification (Commentary)

Purification (Comment) Organism
Ni-NTA column chromatography Pseudomonas putida

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
(E)-2-oxo-4(pyridin-3-yl)-3-butenoic acid
-
Pseudomonas putida 3-(pyridin-3-yl)acrylaldehyde + CO2
-
?
benzoylformate
-
Pseudomonas putida benzaldehyde + CO2
-
?

Synonyms

Synonyms Comment Organism
BFDC
-
Pseudomonas putida

Cofactor

Cofactor Comment Organism Structure
thiamine diphosphate dependent on Pseudomonas putida