Cloned (Comment) | Organism |
---|---|
expressed in Escherichia coli C41 OverExpress cells | Arabidopsis thaliana |
Crystallization (Comment) | Organism |
---|---|
enzyme complexed with (S)-15-aza-14,15-dihydrogeranylgeranyl thiolodiphosphate, vapor diffusion method, using 100 mM sodium citrate (pH 5.4), 30% (w/v) polyethylene glycol 400, 200 mM KH2PO4 | Arabidopsis thaliana |
Protein Variants | Comment | Organism |
---|---|---|
D503A | the mutant exhibits a 7fold reduction in kcat | Arabidopsis thaliana |
E211A | the mutation results in a nearly 500fold reduction in kcat | Arabidopsis thaliana |
N425A | the mutant exhibits a 13fold reduction in kcat | Arabidopsis thaliana |
R340A | the mutant exhibits an 850fold reduction in kcat | Arabidopsis thaliana |
T421A | the mutant exhibits a 163fold reduction in kcat (KM is increased 2fold) | Arabidopsis thaliana |
T421S | the mutant exhibits a 3fold reduction in kcat | Arabidopsis thaliana |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.0008 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425H, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.0017 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme E211A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.0018 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.002 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme R340A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.0029 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme D503A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.003 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421S, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.003 | - |
(E,E,E)-geranylgeranyl diphosphate | wild type enzyme, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.006 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421A, at pH 7.8 and 22°C | Arabidopsis thaliana |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Mg2+ | required for optimal catalytic activity | Arabidopsis thaliana |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
(E,E,E)-geranylgeranyl diphosphate | Arabidopsis thaliana | - |
ent-copalyl diphosphate | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Arabidopsis thaliana | Q38802 | - |
- |
Purification (Comment) | Organism |
---|---|
Ni-NTA His-Bind resin column chromatography | Arabidopsis thaliana |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
(E,E,E)-geranylgeranyl diphosphate | - |
Arabidopsis thaliana | ent-copalyl diphosphate | - |
? | |
additional information | no activity with (S)-15-aza-14,15-dihydrogeranylgeranyl thiolodiphosphate | Arabidopsis thaliana | ? | - |
? |
Synonyms | Comment | Organism |
---|---|---|
CPS | - |
Arabidopsis thaliana |
Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.0011 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme R340A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.0019 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme E211A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.006 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.012 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425H, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.071 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.13 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme D503A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.3 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421S, at pH 7.8 and 22°C | Arabidopsis thaliana | |
0.9 | - |
(E,E,E)-geranylgeranyl diphosphate | wild type enzyme, at pH 7.8 and 22°C | Arabidopsis thaliana |
kcat/KM Value [1/mMs-1] | kcat/KM Value Maximum [1/mMs-1] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.55 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme R340A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
1 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
1.1 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme E211A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
20 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425H, at pH 7.8 and 22°C | Arabidopsis thaliana | |
40 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme N425A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
45 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme D503A, at pH 7.8 and 22°C | Arabidopsis thaliana | |
100 | - |
(E,E,E)-geranylgeranyl diphosphate | mutant enzyme T421S, at pH 7.8 and 22°C | Arabidopsis thaliana | |
300 | - |
(E,E,E)-geranylgeranyl diphosphate | wild type enzyme, at pH 7.8 and 22°C | Arabidopsis thaliana |