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Literature summary extracted from

  • Hauschild, J.E.; Masai, E.; Sugiyama, K.; Hatta, T.; Kimbara, K.; Fukuda, M.; Yano, K.
    Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene (1996), Appl. Environ. Microbiol., 62, 2940-2946.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.11.39
-
Pseudomonas oleovorans
1.13.11.39 etbC gene successfully cloned from RCD1 chromosomal DNA Rhodococcus sp.

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
1.13.11.39 34000
-
8 * 34000, SDS-PAGE Rhodococcus sp.
1.13.11.39 300000
-
gel filtration Rhodococcus sp.

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas aeruginosa
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas sp.
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas putida
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus sp.
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus erythropolis
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Burkholderia cepacia
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas oleovorans
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Sphingobium yanoikuyae
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus P6
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus sp. RHA1
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas oleovorans KF707
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas putida KF715
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus erythropolis TA421
-
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.39 Burkholderia cepacia
-
organism reclassified, prior refered as Pseudomonas sp. strain LB400 or Pseudomonas cepacia strain LB400
-
1.13.11.39 Pseudomonas aeruginosa
-
-
-
1.13.11.39 Pseudomonas oleovorans
-
-
-
1.13.11.39 Pseudomonas oleovorans KF707
-
-
-
1.13.11.39 Pseudomonas putida
-
-
-
1.13.11.39 Pseudomonas putida KF715
-
-
-
1.13.11.39 Pseudomonas sp.
-
-
-
1.13.11.39 Rhodococcus erythropolis
-
-
-
1.13.11.39 Rhodococcus erythropolis TA421
-
-
-
1.13.11.39 Rhodococcus globerulus
-
-
-
1.13.11.39 Rhodococcus globerulus P6
-
-
-
1.13.11.39 Rhodococcus sp.
-
strain RDC1 derived from strain RHA1, bphC gene mutant
-
1.13.11.39 Rhodococcus sp. Q53126
-
-
1.13.11.39 Rhodococcus sp. RHA1 Q53126
-
-
1.13.11.39 Sphingobium yanoikuyae
-
formerly Pseudomonas paucimobilis strain Q1
-

Purification (Commentary)

EC Number Purification (Comment) Organism
1.13.11.39 strain RDC1, bphC gene mutant Rhodococcus sp.

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
1.13.11.39 22.2
-
-
Rhodococcus sp.

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.39 3-chlorocatechol + O2
-
Burkholderia cepacia 3-chloro-2-hydroxymuconic semialdehyde + H2O
-
?
1.13.11.39 3-chlorocatechol + O2 BphC from strain RHA1 weak relative activity Rhodococcus sp. 3-chloro-2-hydroxymuconic semialdehyde + H2O
-
?
1.13.11.39 3-chlorocatechol + O2 Etbc from strain RDC1 Rhodococcus sp. 3-chloro-2-hydroxymuconic semialdehyde + H2O
-
?
1.13.11.39 3-chlorocatechol + O2 BphC from strain RHA1 weak relative activity Rhodococcus sp. RHA1 3-chloro-2-hydroxymuconic semialdehyde + H2O
-
?
1.13.11.39 3-methylcatechol + O2
-
Pseudomonas sp. 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Pseudomonas putida 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Burkholderia cepacia 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Pseudomonas oleovorans 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Sphingobium yanoikuyae 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2 strain RHA1 Rhodococcus sp. 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2 strain RHA1 Rhodococcus sp. RHA1 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Pseudomonas oleovorans KF707 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 3-methylcatechol + O2
-
Pseudomonas putida KF715 2-hydroxy-6-oxohepta-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2
-
Pseudomonas sp. 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2
-
Pseudomonas oleovorans 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2
-
Sphingobium yanoikuyae 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2 strain RHA1 Rhodococcus sp. 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2 strain RHA1 Rhodococcus sp. RHA1 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 4-methylcatechol + O2
-
Pseudomonas oleovorans KF707 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas aeruginosa 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas sp. 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas putida 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus sp. 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus erythropolis 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Burkholderia cepacia 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas oleovorans 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Sphingobium yanoikuyae 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus globerulus 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus globerulus P6 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus sp. RHA1 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas oleovorans KF707 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Pseudomonas putida KF715 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 biphenyl-2,3-diol + O2
-
Rhodococcus erythropolis TA421 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
?
1.13.11.39 catechol + O2
-
Pseudomonas sp. ?
-
?
1.13.11.39 catechol + O2
-
Pseudomonas putida ?
-
?
1.13.11.39 catechol + O2
-
Burkholderia cepacia ?
-
?
1.13.11.39 catechol + O2
-
Pseudomonas oleovorans ?
-
?
1.13.11.39 catechol + O2
-
Sphingobium yanoikuyae ?
-
?
1.13.11.39 catechol + O2 strain RHA1 Rhodococcus sp. ?
-
?
1.13.11.39 catechol + O2 strain RHA1 Rhodococcus sp. RHA1 ?
-
?
1.13.11.39 catechol + O2
-
Pseudomonas oleovorans KF707 ?
-
?
1.13.11.39 catechol + O2
-
Pseudomonas putida KF715 ?
-
?

Subunits

EC Number Subunits Comment Organism
1.13.11.39 octamer
-
Pseudomonas sp.
1.13.11.39 octamer
-
Pseudomonas putida
1.13.11.39 octamer
-
Pseudomonas oleovorans
1.13.11.39 octamer 8 * 34000, SDS-PAGE Rhodococcus sp.

Synonyms

EC Number Synonyms Comment Organism
1.13.11.39 2,3-DHBD
-
Pseudomonas sp.
1.13.11.39 2,3-DHBD
-
Rhodococcus sp.
1.13.11.39 EtbC strain RDC1, bphC gene mutant Rhodococcus sp.
1.13.11.39 EtbC
-
Rhodococcus sp.

pH Stability

EC Number pH Stability pH Stability Maximum Comment Organism
1.13.11.39 8.5
-
stable at Rhodococcus sp.