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Literature summary extracted from

  • Hu, Y.; Qin, F.; Huang, L.; Sun, Q.; Li, C.; Zhao, Y.; Zhou, D.X.
    Rice histone deacetylase genes display specific expression patterns and developmental functions (2009), Biochem. Biophys. Res. Commun., 388, 266-271.
    View publication on PubMed

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.5.1.98 trichostatin-A specific HDAC inhibitor Oryza sativa Indica Group
3.5.1.98 trichostatin-A specific HDAC inhibitor; specific HDAC inhibitor; specific HDAC inhibitor Oryza sativa Japonica Group

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.5.1.98 N-acetyl-lysine-histone H4 + H2O Oryza sativa Japonica Group
-
 acetate + histone H4
-
 ?
3.5.1.98 N-acetyl-lysine-histone H4 + H2O Oryza sativa Indica Group
-
 acetate + histone H4
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
3.5.1.98 Oryza sativa Indica Group
-
 variety Minghui63
-
3.5.1.98 Oryza sativa Japonica Group Q2QWU2 variety Zhonghua11
-
3.5.1.98 Oryza sativa Japonica Group Q5VP94 variety Zhonghua11
-
3.5.1.98 Oryza sativa Japonica Group Q6YV04 variety Zhonghua11
-

Source Tissue

EC Number Source Tissue Comment Organism Textmining
3.5.1.98 callus
-
 Oryza sativa Japonica Group
-
3.5.1.98 callus
-
 Oryza sativa Indica Group
-
3.5.1.98 endosperm
-
 Oryza sativa Japonica Group
-
3.5.1.98 endosperm
-
 Oryza sativa Indica Group
-
3.5.1.98 leaf
-
 Oryza sativa Japonica Group
-
3.5.1.98 leaf
-
 Oryza sativa Indica Group
-
3.5.1.98 seed
-
 Oryza sativa Japonica Group
-
3.5.1.98 seed
-
 Oryza sativa Indica Group
-
3.5.1.98 seedling
-
 Oryza sativa Japonica Group
-
3.5.1.98 seedling
-
 Oryza sativa Indica Group
-
3.5.1.98 shoot
-
 Oryza sativa Japonica Group
-
3.5.1.98 shoot
-
 Oryza sativa Indica Group
-
3.5.1.98 stamen
-
 Oryza sativa Japonica Group
-
3.5.1.98 stamen
-
 Oryza sativa Indica Group
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.5.1.98 N-acetyl-lysine-histone H4 + H2O
-
 Oryza sativa Japonica Group acetate + histone H4
-
 ?
3.5.1.98 N-acetyl-lysine-histone H4 + H2O
-
 Oryza sativa Indica Group acetate + histone H4
-
 ?

Synonyms

EC Number Synonyms Comment Organism
3.5.1.98 HDAC
-
 Oryza sativa Japonica Group
3.5.1.98 HDAC
-
 Oryza sativa Indica Group
3.5.1.98 HDAC1
-
 Oryza sativa Japonica Group
3.5.1.98 HDAC10
-
 Oryza sativa Japonica Group
3.5.1.98 HDAC2
-
 Oryza sativa Japonica Group
3.5.1.98 HDAC3
-
 Oryza sativa Japonica Group
3.5.1.98 HDAC6
-
 Oryza sativa Japonica Group

General Information

EC Number General Information Comment Organism
3.5.1.98 malfunction down-regulation of HDAC gene HDA710 induces a semi-dwarf phenotype, down-regulation of HDAC gene HDA704 affects plant height and flag leaf development Oryza sativa Japonica Group
3.5.1.98 malfunction down-regulation of HDAC gene HDA710 induces a semi-dwarf phenotype, down-regulation of HDAC gene HDA704 affects plant height and flag leaf development Oryza sativa Indica Group
3.5.1.98 physiological function the HDAC gene HDA703 is involved in histone H4 acetylation in rice, HDAC gene HDA703 has a function during plant reproductive development and seed morphology, HDA702/HDAC1 and HDA710 play a similar but important role in root and vegetative growth Oryza sativa Japonica Group
3.5.1.98 physiological function the HDAC gene HDA703 is involved in histone H4 acetylation in rice, HDAC gene HDA703 has a function during plant reproductive development and seed morphology, HDA702/HDAC1 and HDA710 play a similar but important role in root and vegetative growth Oryza sativa Indica Group