Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary extracted from

  • Frey, P.A.; Reed, G.H.
    Pyridoxal-5'-phosphate as the catalyst for radical isomerization in reactions of PLP-dependent aminomutases (2011), Biochim. Biophys. Acta, 1814, 1548-1557.
    View publication on PubMed

Inhibitors

EC Number Inhibitors Comment Organism Structure
5.4.3.2 4,5-dehydro-(S)-lysine suicide inactivator Clostridium subterminale

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
5.4.3.2 Fe2+ the activity is modestly increased by the addition of ferrous iron Clostridium subterminale

Organism

EC Number Organism UniProt Comment Textmining
5.4.3.2 Clostridium subterminale
-
-
-
5.4.3.2 Clostridium subterminale SB4
-
-
-
5.4.3.3 Acetoanaerobium sticklandii
-
-
-
5.4.3.3 Porphyromonas gingivalis
-
-
-

Oxidation Stability

EC Number Oxidation Stability Organism
5.4.3.2 the enzyme is extremely sensitive to oxidation by air and is active under anaerobic conditions Clostridium subterminale

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
5.4.3.2 (S)-lysine
-
Clostridium subterminale (S)-beta-lysine
-
r
5.4.3.2 (S)-lysine
-
Clostridium subterminale SB4 (S)-beta-lysine
-
r
5.4.3.3 (R)-lysine best substrate Porphyromonas gingivalis ?
-
?
5.4.3.3 (S)-beta-lysine
-
Acetoanaerobium sticklandii 3,5-diaminohexanoate
-
r
5.4.3.3 (S)-beta-lysine
-
Porphyromonas gingivalis 3,5-diaminohexanoate
-
r
5.4.3.3 (S)-lysine
-
Porphyromonas gingivalis ?
-
?
5.4.3.3 4-thia-(R)-lysine 4-thia-(R)-lysine reacts with the complex of pyridoxal 5'-phosphate, adenosylcobalamin, and lysine 5,6-aminomutase to generate cob(II)alamin, 5'-deoxyadenosine, and 4-thialysine-based free radicals Acetoanaerobium sticklandii ?
-
?
5.4.3.3 4-thia-(S)-lysine 4-thia-(S)-lysine reacts with the complex of pyridoxal 5'-phosphate, adenosylcobalamin, and lysine 5,6-aminomutase to generate cob(II)alamin, 5'-deoxyadenosine, and 4-thialysine-based free radicals Acetoanaerobium sticklandii ?
-
?

Subunits

EC Number Subunits Comment Organism
5.4.3.3 heterodimer
-
Acetoanaerobium sticklandii
5.4.3.3 heterodimer
-
Porphyromonas gingivalis

Synonyms

EC Number Synonyms Comment Organism
5.4.3.2 LAM
-
Clostridium subterminale
5.4.3.3 (R)-lysine mutase formerly Acetoanaerobium sticklandii
5.4.3.3 (R)-lysine mutase formerly Porphyromonas gingivalis
5.4.3.3 beta-Lysine mutase
-
Acetoanaerobium sticklandii
5.4.3.3 beta-Lysine mutase
-
Porphyromonas gingivalis

Cofactor

EC Number Cofactor Comment Organism Structure
5.4.3.2 4Fe-4S-center
-
Clostridium subterminale
5.4.3.2 pyridoxal 5'-phosphate dependent on Clostridium subterminale
5.4.3.3 adenosylcobalamin
-
Acetoanaerobium sticklandii
5.4.3.3 adenosylcobalamin
-
Porphyromonas gingivalis
5.4.3.3 pyridoxal 5'-phosphate
-
Acetoanaerobium sticklandii
5.4.3.3 pyridoxal 5'-phosphate
-
Porphyromonas gingivalis

kcat/KM [mM/s]

EC Number kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
5.4.3.3 0.00043
-
(S)-lysine pH and temperature not specified in the publication Porphyromonas gingivalis
5.4.3.3 0.48
-
(S)-beta-lysine pH and temperature not specified in the publication Porphyromonas gingivalis
5.4.3.3 0.63
-
(R)-lysine pH and temperature not specified in the publication Porphyromonas gingivalis