Literature summary extracted from
Pietra, F.
On the quest of dioxygen by monomeric sarcosine oxidase. A molecular dynamics investigation (2015), Chem. Biodivers., 12, 1163-1171 .
Inhibitors
EC Number |
Inhibitors |
Comment |
Organism |
Structure |
---|
1.5.3.1 |
Furoic acid |
- |
Bacillus sp. BSD-8 |
|
Organism
EC Number |
Organism |
UniProt |
Comment |
Textmining |
---|
1.5.3.1 |
Bacillus sp. BSD-8 |
Q6ITC6 |
- |
- |
Reaction
EC Number |
Reaction |
Comment |
Organism |
Reaction ID |
---|
1.5.3.1 |
sarcosine + H2O + O2 = glycine + formaldehyde + H2O2 |
molecular dynamics investigation by random acceleration molecular dynamics simulations with an ensemble made of the bacterial monomeric sarcosine oxidase (2GF3), O2, and the inhibitor furoic acid to mimic sarcosine |
Bacillus sp. BSD-8 |
|
Substrates and Products (Substrate)
EC Number |
Substrates |
Comment Substrates |
Organism |
Products |
Comment (Products) |
Rev. |
Reac. |
---|
1.5.3.1 |
sarcosine + H2O + O2 |
molecular dynamics investigation by random acceleration molecular dynamics simulations with an ensemble made of the bacterial monomeric sarcosine oxidase (2GF3), O2, and the inhibitor furoic acid to mimic sarcosine. The ensemble is solvated by in a periodic box, while an external tiny force acts randomly to expel O2 from the center of activation, located between residue K265 and the si face of the flavin ring of the flavin adenine dinucleotide cofactor, moving it toward the solvent |
Bacillus sp. BSD-8 |
glycine + formaldehyde + H2O2 |
- |
? |
|
Subunits
EC Number |
Subunits |
Comment |
Organism |
---|
1.5.3.1 |
monomer |
1 * 43182, calculated from sequence |
Bacillus sp. BSD-8 |
Synonyms
EC Number |
Synonyms |
Comment |
Organism |
---|
1.5.3.1 |
MSOX |
- |
Bacillus sp. BSD-8 |