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Literature summary extracted from

  • Hermida-Carrera, C.; Kapralov, M.; Galmes, J.
    Rubisco catalytic properties and temperature response in crops (2016), Plant Physiol., 171, 2549-2561 .
    View publication on PubMedView publication on EuropePMC

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.1.1.39 0.008
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Oryza sativa
4.1.1.39 0.0086
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Glycine max
4.1.1.39 0.009
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Hordeum vulgare
4.1.1.39 0.0111
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Lactuca sativa
4.1.1.39 0.0149
-
 CO2 presence of 21% oxygen, pH 8.0, 25°C Hordeum vulgare
4.1.1.39 0.0162
-
 CO2 presence of 21% oxygen, pH 8.0, 25°C Glycine max
4.1.1.39 0.0173
-
 CO2 presence of 21% oxygen, pH 8.0, 25°C Oryza sativa
4.1.1.39 0.0182
-
 CO2 presence of 21% oxygen, pH 8.0, 25°C Lactuca sativa
4.1.1.39 0.0316
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Zea mays
4.1.1.39 0.042
-
 CO2 presence of 21% oxygen, pH 8.0, 25°C Zea mays

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Glycine max
-
-
-
4.1.1.39 Hordeum vulgare
-
-
-
4.1.1.39 Lactuca sativa
-
-
-
4.1.1.39 Oryza sativa
-
-
-
4.1.1.39 Zea mays
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Hordeum vulgare 2 3-phospho-D-glycerate + 2 H+
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Zea mays 2 3-phospho-D-glycerate + 2 H+
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Glycine max 2 3-phospho-D-glycerate + 2 H+
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Lactuca sativa 2 3-phospho-D-glycerate + 2 H+
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Oryza sativa 2 3-phospho-D-glycerate + 2 H+
-
 ?

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.1.1.39 1.5
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Glycine max
4.1.1.39 2.1
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Oryza sativa
4.1.1.39 2.2
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Lactuca sativa
4.1.1.39 2.4
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Hordeum vulgare
4.1.1.39 4.1
-
 CO2 nonoxygenic conditions, pH 8.0, 25°C Zea mays

General Information

EC Number General Information Comment Organism
4.1.1.39 metabolism comparison of Rubisco kinetics for 20 crop species at three different temperatures. Rubisco kinetics and their temperature dependency are species specific and largely affect the assimilation potential of Rubisco from the different crops Hordeum vulgare
4.1.1.39 metabolism comparison of Rubisco kinetics for 20 crop species at three different temperatures. Rubisco kinetics and their temperature dependency are species specific and largely affect the assimilation potential of Rubisco from the different crops Zea mays
4.1.1.39 metabolism comparison of Rubisco kinetics for 20 crop species at three different temperatures. Rubisco kinetics and their temperature dependency are species specific and largely affect the assimilation potential of Rubisco from the different crops Glycine max
4.1.1.39 metabolism comparison of Rubisco kinetics for 20 crop species at three different temperatures. Rubisco kinetics and their temperature dependency are species specific and largely affect the assimilation potential of Rubisco from the different crops Lactuca sativa
4.1.1.39 metabolism comparison of Rubisco kinetics for 20 crop species at three different temperatures. Rubisco kinetics and their temperature dependency are species specific and largely affect the assimilation potential of Rubisco from the different crops Oryza sativa

kcat/KM [mM/s]

EC Number kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
4.1.1.39 70
-
 CO2 oxygenase catalytic efficiency, pH 8.0, 25°C Zea mays
4.1.1.39 90
-
 CO2 oxygenase catalytic efficiency, pH 8.0, 25°C Glycine max
4.1.1.39 110
-
 CO2 carboxylase catalytic efficiency, pH 8.0, 25°C Zea mays
4.1.1.39 120
-
 CO2 oxygenase catalytic efficiency, pH 8.0, 25°C Lactuca sativa
4.1.1.39 170
-
 CO2 carboxylase catalytic efficiency, pH 8.0, 25°C Glycine max
4.1.1.39 170
-
 CO2 oxygenase catalytic efficiency, pH 8.0, 25°C Hordeum vulgare
4.1.1.39 190
-
 CO2 carboxylase catalytic efficiency, pH 8.0, 25°C Lactuca sativa
4.1.1.39 260
-
 CO2 carboxylase catalytic efficiency, pH 8.0, 25°C Oryza sativa
4.1.1.39 273
-
 CO2 oxygenase catalytic efficiency, pH 8.0, 25°C Oryza sativa
4.1.1.39 280
-
 CO2 carboxylase catalytic efficiency, pH 8.0, 25°C Hordeum vulgare