EC Number | Cloned (Comment) | Organism |
---|---|---|
2.1.1.141 | genes PaSABATH4, PaSABATH5, and PaSABATH10, DNA and amino acid sequence determination and analysis, sequence comparisons, genetic organization and localization of SABATH genes in the genome of Picea abies, overview. Sequence similarities among PaSABATHs range from 49% to 91%. Most PaSABATH genes have three introns with the exception of PaSABATH4, PaSABATH5, and PaSABATH10, each of which contains two introns. Phylogenetic analysis and tree | Picea abies |
2.1.1.274 | genes PsSABATH2, DNA and amino acid sequence determination and analysis, sequence comparisons, genetic organization and localization of SABATH genes PsSABATH1-10 in the genome of Picea abies, overview. Sequence similarities among PaSABATHs range from 49% to 91%. Most PaSABATH genes have three introns with the exception of PaSABATH4, PaSABATH5 and PaSABATH10, each of which contains two introns. Phylogenetic analysis and tree | Picea abies |
2.1.1.278 | gene PaSABATH1, DNA and amino acid sequence determination and analysis, sequence comparisons, genetic organization and localization of SABATH genes in the genome of Picea abies, overview. Sequence similarities among PaSABATHs range from 49% to 91%. Most PaSABATH genes have three introns with the exception of PaSABATH4, PaSABATH5 and PaSABATH10, each of which contains two introns. Phylogenetic analysis and tree | Picea abies |
EC Number | Inhibitors | Comment | Organism | Structure |
---|---|---|---|---|
2.1.1.141 | Ca2+ | inhibition of all isozymes | Picea abies | |
2.1.1.141 | Fe2+ | inhibition of all isozymes | Picea abies | |
2.1.1.141 | Mn2+ | inhibition of all isozymes | Picea abies | |
2.1.1.141 | Zn2+ | strong inhibition of all isozymes | Picea abies |
EC Number | KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
2.1.1.141 | 0.0063 | - |
jasmonate | pH 7.0, 18°C, isozyme PtJAMT2 | Picea abies | |
2.1.1.141 | 0.0146 | - |
jasmonate | pH 7.0, 18°C, isozyme PtJAMT3 | Picea abies | |
2.1.1.141 | 0.0317 | - |
jasmonate | pH 6.5, 27°C, isozyme PtJAMT1 | Picea abies |
EC Number | Metals/Ions | Comment | Organism | Structure |
---|---|---|---|---|
2.1.1.141 | additional information | K+, Na+, Mg2+, and NH4+ have minimal effect on the isozyme activities | Picea abies |
EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
2.1.1.141 | S-adenosyl-L-methionine + jasmonate | Picea abies | - |
S-adenosyl-L-homocysteine + methyl jasmonate | - |
? | |
2.1.1.274 | S-adenosyl-L-methionine + benzoate | Picea abies | - |
methyl benzoate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.274 | S-adenosyl-L-methionine + salicylate | Picea abies | - |
methyl salicylate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.278 | S-adenosyl-L-methionine + indole-3-acetic acid | Picea abies | - |
S-adenosyl-L-homocysteine + methyl indole-3-acetic acid | - |
? |
EC Number | Organism | UniProt | Comment | Textmining |
---|---|---|---|---|
2.1.1.141 | Picea abies | - |
- |
- |
2.1.1.274 | Picea abies | - |
- |
- |
2.1.1.278 | Picea abies | - |
- |
- |
EC Number | Source Tissue | Comment | Organism | Textmining |
---|---|---|---|---|
2.1.1.141 | cone | - |
Picea abies | - |
2.1.1.141 | additional information | mixed tissues including needles, stems, and young male cones and female cones are collected from a mature Norway spruce (Picea abies) tree grown on the campus of the University of Tennessee, Knoxville, TN with a GPS coordinates of 35.948 and -83.942 | Picea abies | - |
2.1.1.141 | needle | - |
Picea abies | - |
2.1.1.274 | cone | - |
Picea abies | - |
2.1.1.274 | additional information | mixed tissues including needles, stems, and young male cones and female cones are collected from a mature Norway spruce (Picea abies) tree grown on the campus of the University of Tennessee, Knoxville, TN with a GPS coordinates of 35.948 and -83.942 | Picea abies | - |
2.1.1.274 | needle | - |
Picea abies | - |
2.1.1.278 | cone | - |
Picea abies | - |
2.1.1.278 | additional information | mixed tissues including needles, stems, and young male cones and female cones are collected from a mature Norway spruce (Picea abies) tree grown on the campus of the University of Tennessee, Knoxville, TN with a GPS coordinates of 35.948 and -83.942 | Picea abies | - |
2.1.1.278 | needle | - |
Picea abies | - |
EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
2.1.1.141 | additional information | the isozymes are specific for jasmonate, no or poor activities with indole-3-acetic acid, gibberellic acid 3, or salicylic acid | Picea abies | ? | - |
- |
|
2.1.1.141 | S-adenosyl-L-methionine + jasmonate | - |
Picea abies | S-adenosyl-L-homocysteine + methyl jasmonate | - |
? | |
2.1.1.274 | additional information | isozyme PaSABATH2 has the highest level of specific activity with salicylic acid and is designated as PaSAMT (EC 2.1.1.274). For comparison, PaSAMT is also assayed with two compounds of similar structure benzoic acid and anthranilic acid (cf. EC 2.1.1.273). While PaSAMT has no activity with anthranilic acid, its activity with benzoic acid is approximately 8% of that with salicylic acid. Radiochemical assay method | Picea abies | ? | - |
- |
|
2.1.1.274 | S-adenosyl-L-methionine + benzoate | - |
Picea abies | methyl benzoate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.274 | S-adenosyl-L-methionine + benzoate | 8% activity compared to salicylate | Picea abies | methyl benzoate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.274 | S-adenosyl-L-methionine + salicylate | - |
Picea abies | methyl salicylate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.274 | S-adenosyl-L-methionine + salicylate | best substrate | Picea abies | methyl salicylate + S-adenosyl-L-homocysteine | - |
? | |
2.1.1.278 | additional information | PaSABATH1 has the highest level of specific activity with IAA and is renamed as PaIAMT. No activity with salicylic acid, jasmonic acid, and giberellic acid 3 | Picea abies | ? | - |
- |
|
2.1.1.278 | S-adenosyl-L-methionine + indole-3-acetic acid | - |
Picea abies | S-adenosyl-L-homocysteine + methyl indole-3-acetic acid | - |
? |
EC Number | Synonyms | Comment | Organism |
---|---|---|---|
2.1.1.141 | PaJAMT1 | - |
Picea abies |
2.1.1.141 | PaJAMT2 | - |
Picea abies |
2.1.1.141 | PaJAMT3 | - |
Picea abies |
2.1.1.141 | PaSABATH10 | - |
Picea abies |
2.1.1.141 | PaSABATH4 | - |
Picea abies |
2.1.1.141 | PaSABATH5 | - |
Picea abies |
2.1.1.274 | PaSABATH2 | - |
Picea abies |
2.1.1.274 | PaSAMT | - |
Picea abies |
2.1.1.278 | IAA methyltransferase | - |
Picea abies |
2.1.1.278 | PaIAMT | - |
Picea abies |
2.1.1.278 | PaSABATH1 | - |
Picea abies |
EC Number | Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|---|
2.1.1.141 | 18 | - |
isozymes PtJAMT2 and PtJAMT3 | Picea abies |
2.1.1.141 | 27 | - |
isozyme PtJAMT1 | Picea abies |
EC Number | Temperature Minimum [°C] | Temperature Maximum [°C] | Comment | Organism |
---|---|---|---|---|
2.1.1.141 | additional information | - |
inactivation of isozyme PtJAMT1 above 40°C, of isozyme PtJAMT2 above 60°C, and of isozyme PtJAMT3 above 50°C | Picea abies |
2.1.1.141 | 4 | 50 | activity range of isozymes PtJAMT2 and PtJAMT3, profiles overview | Picea abies |
2.1.1.141 | 4 | 37 | activity range of isozyme PtJAMT1, profile overview | Picea abies |
EC Number | Temperature Stability Minimum [°C] | Temperature Stability Maximum [°C] | Comment | Organism |
---|---|---|---|---|
2.1.1.141 | 60 | - |
activity of all three enzymes is lost when incubated at 60°C for 30 min | Picea abies |
EC Number | pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|---|
2.1.1.141 | 6.5 | - |
isozyme PtJAMT1 | Picea abies |
2.1.1.141 | 7 | - |
isozymes PtJAMT2 and PtJAMT3 | Picea abies |
EC Number | pH Minimum | pH Maximum | Comment | Organism |
---|---|---|---|---|
2.1.1.141 | additional information | - |
inactivation of isozyme PtJAMT1 above pH 8.0, of isozyme PtJAMT2 above pH 8.5, and of isozyme PtJAMT3 above pH 9.0 | Picea abies |
EC Number | Cofactor | Comment | Organism | Structure |
---|---|---|---|---|
2.1.1.141 | S-adenosyl-L-methionine | - |
Picea abies | |
2.1.1.274 | S-adenosyl-L-methionine | - |
Picea abies | |
2.1.1.278 | S-adenosyl-L-methionine | - |
Picea abies |
EC Number | General Information | Comment | Organism |
---|---|---|---|
2.1.1.141 | evolution | the enzyme belongs to the protein family of SABATH methyltransferases, ten genes encode isozymes PaSABATH1-10. Five of the PaSABATH isozymes (PaSABATH3, PaSABATH6, PaSABATH7, PaSABATH8, and PaSABATH9) do not show activity with any of the four substrates, i.e. indole-3-acetic acid, jasmonic acid, giberellic acid A3, and salicylic acid, the other five of the PaSABATHs each show activity with one or more of the four substrates. PaSABATH1 has the highest level of specific activity with indole-3-acetic acid and is renamed as PaIAMT (EC 2.1.1.278). PaSABATH2 has the highest level of specific activity with salicylic acid and is designated as PaSAMT (EC 2.1.1.274). For comparison, PaSAMT is also assayed with two compounds of similar structure benzoic acid and anthranilic acid (cf. EC 2.1.1.273). While PaSAMT has no activity with anthranilic acid, its activity with benzoic acid is approximately 8% of that with salicylic acid. PaSABATH4, PaSABATH5 and PaSABATH10 show the highest level of specific activity with jasmonic acid and are renamed PaJAMT1, PaJAMT2, and PaJAMT3, respectively (EC 2.1.1.141). Their products are confirmed to be methyljasmonate | Picea abies |
2.1.1.141 | additional information | structural modeling of isozymes PaJAMT1 and PaJAMT3, docking structures with Indole-3-acetic acid (IAA) suggest that the active-site residues (e.g. V339 and F343 from PaJAMT1 and M347 and F351 from PaJAMT3) interfere with IAA binding for the methyl transfer, and this is consistent with the relatively low activities of these two enzymes toward IAA.When jasmonate (JA) is docked into the active sites of PaJAMT1 and PaJAMT3, the steric clashes with the active site residues are not observed, and this observation structurally validates that they are jasmonate methyltransferases, JAMTs | Picea abies |
2.1.1.274 | evolution | the enzyme belongs to the protein family of SABATH methyltransferases, ten genes encode isozymes PaSABATH1-10. Five of the PaSABATH isozymes (PaSABATH3, PaSABATH6, PaSABATH7, PaSABATH8, and PaSABATH9) do not show activity with any of the four substrates, i.e. indole-3-acetic acid, jasmonic acid, giberellic acid A3, and salicylic acid, the other five of the PaSABATHs each show activity with one or more of the four substrates. PaSABATH1 has the highest level of specific activity with indole-3-acetic acid and is renamed as PaIAMT (EC 2.1.1.275). PaSABATH2 has the highest level of specific activity with salicylic acid and is designated as PaSAMT (EC 2.1.1.274). For comparison, PaSAMT is also assayed with two compounds of similar structure benzoic acid and anthranilic acid (cf. EC 2.1.1.273). While PaSAMT has no activity with anthranilic acid, its activity with benzoic acid is approximately 8% of that with salicylic acid. PaSABATH4, PaSABATH5 and PaSABATH10 show the highest level of specific activity with jasmonic acid and are renamed PaJAMT1, PaJAMT2, and PaJAMT3, respectively (EC 2.1.1.141). Their products are confirmed to be methyljasmonate | Picea abies |
2.1.1.274 | metabolism | indole-3-acetic acid (IAA), gibberellins (GAs), salicylic acid (SA) and jasmonic acid (JA) exist in methyl ester forms in plants in addition to their free acid forms. The enzymes catalyze methylation of these carboxylic acid phytohormones occurs in form of ten isozymes, PaSABATH1-10 | Picea abies |
2.1.1.278 | evolution | the enzyme belongs to the protein family of SABATH methyltransferases, ten genes encode isozymes PaSABATH1-10. Five of the PaSABATH isozymes (PaSABATH3, PaSABATH6, PaSABATH7, PaSABATH8, and PaSABATH9) do not show activity with any of the four substrates, i.e. indole-3-acetic acid, jasmonic acid, giberellic acid A3, and salicylic acid, the other five of the PaSABATHs each show activity with one or more of the four substrates. PaSABATH1 has the highest level of specific activity with indole-3-acetic acid and is renamed as PaIAMT (EC 2.1.1.278). PaSABATH2 has the highest level of specific activity with salicylic acid and is designated as PaSAMT (EC 2.1.1.274). For comparison, PaSAMT is also assayed with two compounds of similar structure benzoic acid and anthranilic acid (cf. EC 2.1.1.273). While PaSAMT has no activity with anthranilic acid, its activity with benzoic acid is approximately 8% of that with salicylic acid. PaSABATH4, PaSABATH5 and PaSABATH10 show the highest level of specific activity with jasmonic acid and are renamed PaJAMT1, PaJAMT2, and PaJAMT3, respectively (EC 2.1.1.141). Their products are confirmed to be methyljasmonate | Picea abies |
2.1.1.278 | additional information | a structural model for PaIAMTis generated to understand the origin of substrate specificity of PaSABATH methyltransferase. The active site of the PaIAMT model is superposed with that of the X-ray structure of IAMT (PDB ID 3B5I). The substrate indole-3-acetic acid (IAA) is docked into the active site in such way that its carboxyl moiety is located at a suitable position for accepting the methyl group from SAM (AdoMet). The active site of the enzymes is able to accommodate IAA in a reactive configuration. The enzyme has relatively high specificity for IAA. This is in contrast to docking jasmonate (JA) into the active site. When JA is docked into the active sites with the carboxyl moiety located at the suitable position for accepting the methyl group, the side chain of JA made steric clashes with some of the active site residues (F267 and L266 from PaIAMT), and the active site is therefore not able to accommodate JA for the methyl transfer | Picea abies |