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Literature summary extracted from

  • Wang, J.; Hu, T.; Wang, W.; Hu, H.; Wei, Q.; Wei, X.; Bao, C.
    Bioinformatics analysis of the lipoxygenase gene family in radish (Raphanus sativus) and functional characterization in response to abiotic and biotic stresses (2019), Int. J. Mol. Sci., 20, 6095 .
    View publication on PubMedView publication on EuropePMC

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.12 linoleate + O2 Raphanus sativus
-
 (9Z,11E)-13-hydroperoxy-9,11-octadecadienoate
-
 ?
1.13.11.58 linoleate + O2 Raphanus sativus
-
 (10E,12Z)-9-hydroperoxy-10,12-octadecadienoate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.12 Raphanus sativus
-
-
-
1.13.11.58 Raphanus sativus
-
-
-

Source Tissue

EC Number Source Tissue Comment Organism Textmining
1.13.11.12 bolting stage highest expression of isoform LOX7 Raphanus sativus
-
1.13.11.12 flower highest expression of isoform LOX7 Raphanus sativus
-
1.13.11.12 leaf highest expression of isoform LOX6 Raphanus sativus
-
1.13.11.12 root highest expression of isoform LOX3 Raphanus sativus
-
1.13.11.12 seedpod highest expression of isoforms LOX4 and LOX6 Raphanus sativus
-
1.13.11.58 callus highest expression of isoform LOX1 Raphanus sativus
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.12 linoleate + O2
-
 Raphanus sativus (9Z,11E)-13-hydroperoxy-9,11-octadecadienoate
-
 ?
1.13.11.58 linoleate + O2
-
 Raphanus sativus (10E,12Z)-9-hydroperoxy-10,12-octadecadienoate
-
 ?

Synonyms

EC Number Synonyms Comment Organism
1.13.11.12 13-LOX
-
 Raphanus sativus
1.13.11.12 LOX10 isoform Raphanus sativus
1.13.11.12 LOX11 isoform Raphanus sativus
1.13.11.12 LOX3 isoform Raphanus sativus
1.13.11.12 LOX4 isoform Raphanus sativus
1.13.11.12 LOX6 isoform Raphanus sativus
1.13.11.12 LOX7 isoform Raphanus sativus
1.13.11.12 LOX8 isoform Raphanus sativus
1.13.11.12 LOX9 isoform Raphanus sativus
1.13.11.58 9-LOX
-
 Raphanus sativus
1.13.11.58 LOX1 isoform Raphanus sativus
1.13.11.58 LOX2 isoform Raphanus sativus
1.13.11.58 LOX5 isoform Raphanus sativus

Expression

EC Number Organism Comment Expression
1.13.11.12 Raphanus sativus low temperature (4°C) significantly decreases the expression levels of isoforms LOX4, 10, and 11. High temperature (40°C) significantly decreases the expression level of isoform LOX3. NaCl treatment significantly decreases the expression levels of isoforms LOX3, 4, and 6 down
1.13.11.12 Raphanus sativus the expression levels of all isoforms are not affected by the Plasmodiophora brassicae infection additional information
1.13.11.12 Raphanus sativus the exposure to NaCl increases the isoforms LOX7 and LOX8 expression levels by 2.2fold and 3.7fold, respectively. The expression levels of isoforms LOX7, 8, and 9 are considerably upregulated by high (40°C) and low (4°C) temperatures and PEG treatment. Isoform LOX11 expression is upregulated approximately 5fold in response to the high-temperature (40°C) and PEG treatments up
1.13.11.58 Raphanus sativus isoform LOX1 expression is considerably downregulated at low temperature (4°C). Isoforms LOX2 and LOX5 are considerably downregulated by low (4°C) and high (40°C) temperature, and NaCl treatment down
1.13.11.58 Raphanus sativus the expression levels of all isoforms are not affected by the Plasmodiophora brassicae infection additional information
1.13.11.58 Raphanus sativus isoform LOX1 expression is considerably upregulated by PEG treatment up