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TaxTree of Organism Agrobacterium tumefaciens C58
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EC NUMBER 
COMMENTARY 
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preliminary BRENDA-supplied EC number
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,2-dichloroethane degradation
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12DICHLORETHDEG-PWY
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
4-aminobutanoate degradation I
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PWY-6535
4-aminobutanoate degradation II
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PWY-6537
4-aminobutanoate degradation III
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PWY-6536
4-aminobutanoate degradation V
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PWY-5022
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxymandelate degradation
acrylonitrile degradation I
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PWY-7308
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
ammonia assimilation cycle I
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PWY-6963
ammonia assimilation cycle II
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PWY-6964
ammonia assimilation cycle III
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AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
Bifidobacterium shunt
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P124-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
D-galactarate degradation I
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GALACTARDEG-PWY
D-galactarate degradation II
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PWY-6497
D-galacturonate degradation II
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PWY-6486
D-glucuronate degradation II
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PWY-6501
D-lactate to cytochrome bo oxidase electron transfer
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PWY0-1565
degradation of aromatic, nitrogen containing compounds
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dipicolinate biosynthesis
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PWY-8088
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethene biosynthesis I (plants)
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ETHYL-PWY
ethene biosynthesis V (engineered)
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PWY-7124
Fe(II) oxidation
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PWY-6692
formaldehyde assimilation I (serine pathway)
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PWY-1622
GABA shunt I
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GLUDEG-I-PWY
GABA shunt II
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PWY-8346
gamma-hexachlorocyclohexane degradation
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GAMMAHEXCHLORDEG-PWY
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
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DHGLUCONATE-PYR-CAT-PWY
glucosinolate biosynthesis from dihomomethionine
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PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
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PWYQT-4475
glucosinolate biosynthesis from homomethionine
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PWY-1187
glucosinolate biosynthesis from pentahomomethionine
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PWYQT-4474
glucosinolate biosynthesis from phenylalanine
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PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
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PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
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PWYQT-4472
glucosinolate biosynthesis from tryptophan
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PWY-601
glucosinolate biosynthesis from tyrosine
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PWY-7901
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycerol degradation to butanol
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PWY-7003
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen to fumarate electron transfer
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PWY0-1576
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-ascorbate biosynthesis IV (animals, D-glucuronate pathway)
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PWY3DJ-35471
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
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PWY-8142
L-ascorbate biosynthesis VIII (engineered pathway)
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PWY-7165
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-glutamine biosynthesis I
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GLNSYN-PWY
L-lysine biosynthesis I
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DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis III
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PWY-2942
L-lysine biosynthesis VI
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PWY-5097
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
L-methionine salvage cycle II (plants)
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PWY-7270
luteolin triglucuronide degradation
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PWY-7445
mandelate degradation I
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PWY-1501
methylaspartate cycle
mixed acid fermentation
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FERMENTATION-PWY
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
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PWY0-1567
NADH to fumarate electron transfer
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PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
nicotine degradation I (pyridine pathway)
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P181-PWY
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrifier denitrification
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PWY-7084
nitrogen fixation I (ferredoxin)
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N2FIX-PWY
nitrogen remobilization from senescing leaves
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
norspermidine biosynthesis
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PWY-6562
oxalate degradation V
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PWY-6698
partial TCA cycle (obligate autotrophs)
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PWY-5913
pentachlorophenol degradation
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PCPDEG-PWY
photosynthesis light reactions
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PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
proline to cytochrome bo oxidase electron transfer
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PWY0-1544
pyruvate fermentation to propanoate I
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P108-PWY
pyruvate to cytochrome bo oxidase electron transfer
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PWY-7544
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Rubisco shunt
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PWY-5723
S-(6-hydroxy-4-methylhexan-4-yl)-L-cysteinylglycine degradation
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PWY-8302
seleno-amino acid biosynthesis (plants)
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PWY-6936
sorbitol biosynthesis II
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PWY-5530
spermidine biosynthesis II
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PWY-6559
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
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PWY0-1353
succinate to cytochrome bo oxidase electron transfer
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PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
succinate to plastoquinol oxidase
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PWY1YI0-8
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
thymine degradation
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PWY-6430
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
UMP biosynthesis I
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PWY-5686
UMP biosynthesis II
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PWY-7790
UMP biosynthesis III
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PWY-7791
uracil degradation I (reductive)
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PWY-3982
urea degradation II
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PWY-5704
vitamin K-epoxide cycle
xyloglucan degradation II (exoglucanase)
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PWY-6807
4-hydroxymandelate degradation
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4-HYDROXYMANDELATE-DEGRADATION-PWY
methylaspartate cycle
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PWY-6728
vitamin K-epoxide cycle
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PWY-7999
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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UniProt
LINKS TO OTHER DATABASES (specific for Agrobacterium tumefaciens C58)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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