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Information on Organism Methanosarcina thermophila

TaxTree of Organism Methanosarcina thermophila
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
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PWY-6717
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3PG-factor 420 biosynthesis
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PWY-8113
4-chlorobenzoate degradation
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PWY-6215
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
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6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
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PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
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PWY-7852
acetate and ATP formation from acetyl-CoA I
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PWY0-1312
acetate and ATP formation from acetyl-CoA III
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PWY-8328
acetate conversion to acetyl-CoA
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PWY0-1313
acetate fermentation
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acetyl CoA biosynthesis
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acetylene degradation (anaerobic)
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P161-PWY
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
adlupulone and adhumulone biosynthesis
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PWY-7857
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
Amino sugar and nucleotide sugar metabolism
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Aminoacyl-tRNA biosynthesis
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
anapleurotic synthesis of oxalacetate
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Ascorbate and aldarate metabolism
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ascorbate metabolism
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beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Biosynthesis of various secondary metabolites - part 3
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butanoate fermentation
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Butanoate metabolism
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
caffeine degradation V (bacteria, via trimethylurate)
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PWY-6633
Caffeine metabolism
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Calvin-Benson-Bassham cycle
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CALVIN-PWY
Caprolactam degradation
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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carbon tetrachloride degradation II
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PWY-5372
cellulose and hemicellulose degradation (cellulolosome)
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PWY-6784
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin deacetylation
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PWY-7118
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
Chloroalkane and chloroalkene degradation
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cis-geranyl-CoA degradation
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PWY-6672
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
coenzyme B/coenzyme M regeneration I (methanophenazine-dependent)
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PWY-5207
coenzyme M biosynthesis
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coenzyme M biosynthesis I
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P261-PWY
colupulone and cohumulone biosynthesis
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PWY-5133
cyanate degradation
cyanide degradation
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P401-PWY
cyanide detoxification I
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ASPSYNII-PWY
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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cysteine metabolism
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cytosolic NADPH production (yeast)
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PWY-7268
D-cycloserine biosynthesis
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PWY-7274
D-galactose degradation I (Leloir pathway)
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PWY-6317
D-galactose detoxification
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PWY-3821
d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
degradation of hexoses
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degradation of sugar alcohols
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drosopterin and aurodrosopterin biosynthesis
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PWY-7442
Drug metabolism - other enzymes
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Entner Doudoroff pathway
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Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
erythro-tetrahydrobiopterin biosynthesis I
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PWY-5663
ethanol degradation II
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PWY66-21
ethanol degradation III
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PWY66-161
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
factor 420 biosynthesis I (archaea)
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PWY-8112
factor 420 biosynthesis II (mycobacteria)
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PWY-5198
Fe(II) oxidation
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PWY-6692
flavin biosynthesis
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flavin biosynthesis II (archaea)
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PWY-6167
flavin biosynthesis III (fungi)
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PWY-6168
Fluorobenzoate degradation
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Folate biosynthesis
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folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
formaldehyde oxidation I
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RUMP-PWY
formaldehyde oxidation VI (H4MPT pathway)
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PWY-1723
formate oxidation to CO2
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PWY-1881
fructan degradation
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PWY-862
Fructose and mannose metabolism
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Galactose metabolism
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gallate degradation III (anaerobic)
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P3-PWY
GDP-alpha-D-glucose biosynthesis
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PWY-5661
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
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DHGLUCONATE-PYR-CAT-PWY
Glutathione metabolism
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glycerol degradation I
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PWY-4261
glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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glycine degradation (reductive Stickland reaction)
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PWY-8015
glycine metabolism
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glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycogen metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glyoxylate and dicarboxylate metabolism
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glyoxylate assimilation
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PWY-5744
gossypol biosynthesis
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PWY-5773
heterolactic fermentation
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P122-PWY
hydrogen oxidation I (aerobic)
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P283-PWY
hydrogen production
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hydrogen production III
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PWY-6759
hydrogen production VI
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PWY-6780
hydrogen production VIII
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PWY-6785
incomplete reductive TCA cycle
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P42-PWY
Inositol phosphate metabolism
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justicidin B biosynthesis
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PWY-6824
L-ascorbate biosynthesis IV (animals, D-glucuronate pathway)
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PWY3DJ-35471
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
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PWY-8142
L-ascorbate biosynthesis VIII (engineered pathway)
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PWY-7165
L-cysteine biosynthesis I
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CYSTSYN-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
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PWY-I9
L-cysteine biosynthesis VII (from S-sulfo-L-cysteine)
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PWY-7870
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-histidine degradation V
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PWY-5031
L-homocysteine biosynthesis
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PWY-5344
L-isoleucine biosynthesis V
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PWY-5108
L-lactaldehyde degradation
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L-lysine fermentation to acetate and butanoate
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P163-PWY
L-threonine degradation I
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PWY-5437
lactate fermentation
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lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
lipid metabolism
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lupulone and humulone biosynthesis
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PWY-5132
matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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Methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanogenesis from acetate
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METH-ACETATE-PWY
methanogenesis from CO2
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methanogenesis from dimethylamine
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PWY-5248
methanogenesis from H2 and CO2
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METHANOGENESIS-PWY
methanogenesis from methanol
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CO2FORM-PWY
methanogenesis from methylamine
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PWY-5247
methanogenesis from trimethylamine
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PWY-5250
methoxylated aromatic compound degradation II
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PWY-8305
methyl indole-3-acetate interconversion
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PWY-6303
methyl-coenzyme M oxidation to CO2
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PWY-5209
methyl-coenzyme M reduction to methane
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METHFORM-PWY
methylaspartate cycle
methylsalicylate degradation
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PWY18C3-24
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
mRNA capping I
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PWY-7375
N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis
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PWY-8071
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
Neomycin, kanamycin and gentamicin biosynthesis
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nitrate assimilation
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nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
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Nitrotoluene degradation
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non-pathway related
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nucleoside and nucleotide degradation (archaea)
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PWY-5532
ornithine metabolism
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Other glycan degradation
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oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Pentose and glucuronate interconversions
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (oxidative branch) I
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OXIDATIVEPENT-PWY
phenol degradation
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phosphopantothenate biosynthesis I
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PANTO-PWY
photorespiration I
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PWY-181
photorespiration II
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PWY-8362
photorespiration III
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PWY-8363
photosynthesis
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
phytate degradation I
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PWY-4702
preQ0 biosynthesis
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PWY-6703
Propanoate metabolism
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propanol degradation
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Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to acetate II
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PWY-5482
pyruvate fermentation to acetate IV
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PWY-5485
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reductive acetyl coenzyme A pathway
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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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CODH-PWY
reductive acetyl coenzyme A pathway II (autotrophic methanogens)
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PWY-7784
reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Riboflavin metabolism
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Rubisco shunt
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PWY-5723
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II
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PWY-7174
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation III
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PWY-8132
seleno-amino acid biosynthesis (plants)
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PWY-6936
sesamin biosynthesis
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PWY-5469
sorbitol biosynthesis II
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PWY-5530
Sphingolipid metabolism
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stachyose degradation
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PWY-6527
Starch and sucrose metabolism
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starch degradation
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Streptomycin biosynthesis
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sucrose biosynthesis II
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PWY-7238
sucrose degradation III (sucrose invertase)
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PWY-621
sulfoacetaldehyde degradation I
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PWY-1281
sulfolactate degradation II
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PWY-6637
sulfopterin metabolism
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Sulfur metabolism
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superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
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GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of methylsalicylate metabolism
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PWY18C3-25
Taurine and hypotaurine metabolism
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TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
tetrahydrofolate metabolism
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tetrahydromethanopterin biosynthesis
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PWY-6148
tetrahydromonapterin biosynthesis
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PWY0-1433
Thiamine metabolism
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threo-tetrahydrobiopterin biosynthesis
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PWY-6983
threonine metabolism
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trehalose degradation I (low osmolarity)
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TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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PWY0-1182
trehalose degradation IV
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PWY-2722
trehalose degradation V
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PWY-2723
UDP-N-acetyl-D-galactosamine biosynthesis II
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PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
xyloglucan degradation II (exoglucanase)
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PWY-6807
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
the expression of the gene encoding CamH is substantially greater in acetate-grown cells than in methanol- or trimethylamine-grown cells
Manually annotated by BRENDA team
additional information
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neither MtaA-1 nor MtaA-2 are detected in acetate-grown cells and in trimethylamine-grown cells
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
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no activity found in membrane fraction
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Manually annotated by BRENDA team
LINKS TO OTHER DATABASES (specific for Methanosarcina thermophila)