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Information on Organism Shewanella oneidensis

Synonyms:
ATCC 700550; CIP 106686; LMG 19005; LMG:19005; Shewanella oneidensis; Shewanella oneidensis Venkateswaran et al. 1999 emend. Thorell et al. 2019; Shewanella putrefaciens MR-1; Shewanella sp. SCH0401; strain MR-1; Shewanella oneidensis Venkateswaran et al. 1999;
Word Map for Organism Shewanella oneidensis
TaxTree of Organism Shewanella oneidensis
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Alteromonadales can be found in Brenda BRENDA pathways(order)
Shewanellaceae can be found in Brenda BRENDA pathways(family)
Shewanella can be found in Brenda BRENDA pathways(genus)
Shewanella oneidensis can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(R,R)-butanediol biosynthesis
-
-
PWY-5951
(R,R)-butanediol degradation
-
-
PWY3O-246
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,5-anhydrofructose degradation
-
-
PWY-6992
11-oxyandrogens biosynthesis
-
-
PWY-8202
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-methylcitrate cycle I
-
-
PWY0-42
2-methylcitrate cycle II
-
-
PWY-5747
2-oxoglutarate decarboxylation to succinyl-CoA
-
-
PWY-5084
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
-
-
CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
-
-
PWY-7159
3-hydroxy-4-methyl-anthranilate biosynthesis I
-
-
PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
-
-
PWY-7765
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
-
-
6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
-
-
PWY-7539
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
Acarbose and validamycin biosynthesis
-
-
acetaldehyde biosynthesis I
-
-
PWY-6333
acetaldehyde biosynthesis II
-
-
PWY-6330
acetate and ATP formation from acetyl-CoA I
-
-
PWY0-1312
acetate and ATP formation from acetyl-CoA III
-
-
PWY-8328
acetate conversion to acetyl-CoA
-
-
PWY0-1313
acetate fermentation
-
-
acetoacetate degradation (to acetyl CoA)
-
-
ACETOACETATE-DEG-PWY
acetoin degradation
-
-
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
acyl carrier protein metabolism
-
-
PWY-6012
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adlupulone and adhumulone biosynthesis
-
-
PWY-7857
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alanine metabolism
-
-
alpha-Linolenic acid metabolism
-
-
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
Amino sugar and nucleotide sugar metabolism
-
-
Aminoacyl-tRNA biosynthesis
-
-
Aminobenzoate degradation
-
-
aminopropylcadaverine biosynthesis
-
-
PWY0-1303
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
arachidonate biosynthesis
-
-
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
arginine dependent acid resistance
-
-
PWY0-1299
arginine metabolism
-
-
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
assimilatory sulfate reduction I
-
-
SO4ASSIM-PWY
assimilatory sulfate reduction III
-
-
PWY-6683
ATP biosynthesis
-
-
PWY-7980
autoinducer AI-2 biosynthesis I
-
-
PWY-6153
autoinducer AI-2 biosynthesis II (Vibrio)
-
-
PWY-6154
bacterial bioluminescence
-
-
PWY-7723
Bifidobacterium shunt
-
-
P124-PWY
Biosynthesis of 12-, 14- and 16-membered macrolides
-
-
Biosynthesis of secondary metabolites
-
-
Biosynthesis of unsaturated fatty acids
-
-
Biotin metabolism
-
-
bisucaberin biosynthesis
-
-
PWY-6381
bupropion degradation
-
-
PWY66-241
Butanoate metabolism
-
-
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C5-Branched dibasic acid metabolism
-
-
cadaverine biosynthesis
-
-
PWY0-1601
Caffeine metabolism
-
-
camalexin biosynthesis
-
-
CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
cellulose degradation
-
-
cellulose degradation II (fungi)
-
-
PWY-6788
chitin deacetylation
-
-
PWY-7118
chitin derivatives degradation
-
-
PWY-6906
Chloroalkane and chloroalkene degradation
-
-
cis-alkene biosynthesis
-
-
PWY-7869
cis-geranyl-CoA degradation
-
-
PWY-6672
cis-vaccenate biosynthesis
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis
-
-
PWY-7674
CMP-KDO biosynthesis
-
-
colupulone and cohumulone biosynthesis
-
-
PWY-5133
creatine phosphate biosynthesis
-
-
PWY-6158
cutin biosynthesis
-
-
PWY-321
Cyanoamino acid metabolism
-
-
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
cytochrome c biogenesis (system II type)
-
-
PWY-8146
cytochrome c biogenesis (system III type)
-
-
PWY-8145
D-Amino acid metabolism
-
-
D-arabinitol degradation I
-
-
DARABITOLUTIL-PWY
D-glucuronate degradation I
-
-
PWY-5525
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
D-xylose degradation I
-
-
XYLCAT-PWY
degradation of aromatic, nitrogen containing compounds
-
-
degradation of sugar alcohols
-
-
desferrioxamine B biosynthesis
-
-
PWY-6376
desferrioxamine E biosynthesis
-
-
PWY-6375
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
dTDP-D-desosamine biosynthesis
-
-
PWY-6942
dTDP-N-acetylviosamine biosynthesis
-
-
PWY-7316
dTDPLrhamnose biosynthesis
-
-
dTMP de novo biosynthesis (mitochondrial)
-
-
PWY66-385
echinatin biosynthesis
-
-
PWY-6325
erythromycin D biosynthesis
-
-
PWY-7106
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation III
-
-
PWY66-161
ethanol degradation IV
-
-
PWY66-162
ethanol fermentation
-
-
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis V (engineered)
-
-
PWY-7124
Ether lipid metabolism
-
-
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
Fatty acid biosynthesis
-
-
fatty acid biosynthesis initiation (mitochondria)
-
-
PWY66-429
fatty acid biosynthesis initiation (type I)
-
-
PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
Fatty acid degradation
-
-
Fatty acid elongation
-
-
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
Fe(II) oxidation
-
-
PWY-6692
flavin biosynthesis
-
-
flavin biosynthesis I (bacteria and plants)
-
-
RIBOSYN2-PWY
flavin biosynthesis II (archaea)
-
-
PWY-6167
flavin biosynthesis III (fungi)
-
-
PWY-6168
flavonoid biosynthesis
-
-
PWY1F-FLAVSYN
Flavonoid biosynthesis
-
-
flavonoid biosynthesis (in equisetum)
-
-
PWY-6787
flavonoid di-C-glucosylation
-
-
PWY-7897
Folate biosynthesis
-
-
folate polyglutamylation
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde oxidation VII (THF pathway)
-
-
PWY-7909
formate assimilation into 5,10-methylenetetrahydrofolate
-
-
PWY-1722
formate oxidation to CO2
-
-
PWY-1881
formate to dimethyl sulfoxide electron transfer
-
-
PWY0-1356
formate to nitrite electron transfer
-
-
PWY0-1585
formate to trimethylamine N-oxide electron transfer
-
-
PWY0-1355
Fructose and mannose metabolism
-
-
gallate degradation III (anaerobic)
-
-
P3-PWY
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
Glutathione metabolism
-
-
glutathione metabolism
-
-
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
Glycerolipid metabolism
-
-
Glycerophospholipid metabolism
-
-
glycine betaine degradation I
-
-
PWY-3661
glycine betaine degradation II (mammalian)
-
-
PWY-3661-1
glycine betaine degradation III
-
-
PWY-8325
glycine biosynthesis I
-
-
GLYSYN-PWY
glycine degradation (reductive Stickland reaction)
-
-
PWY-8015
glycine metabolism
-
-
Glycine, serine and threonine metabolism
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis V (Pyrococcus)
-
-
P341-PWY
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
gondoate biosynthesis (anaerobic)
-
-
PWY-7663
guanosine nucleotides degradation I
-
-
PWY-6607
guanosine nucleotides degradation II
-
-
PWY-6606
guanosine nucleotides degradation III
-
-
PWY-6608
heme b biosynthesis I (aerobic)
-
-
HEME-BIOSYNTHESIS-II
heme b biosynthesis II (oxygen-independent)
-
-
HEMESYN2-PWY
heme b biosynthesis V (aerobic)
-
-
HEME-BIOSYNTHESIS-II-1
heme metabolism
-
-
hentriaconta-3,6,9,12,15,19,22,25,28-nonaene biosynthesis
-
-
PWY-7027
heterolactic fermentation
-
-
P122-PWY
Histidine metabolism
-
-
histidine metabolism
-
-
homocysteine and cysteine interconversion
-
-
PWY-801
hydrogen oxidation I (aerobic)
-
-
P283-PWY
hydrogen production
-
-
hydrogen sulfide biosynthesis II (mammalian)
-
-
PWY66-426
hydrogen to dimethyl sulfoxide electron transfer
-
-
PWY0-1577
hydrogen to fumarate electron transfer
-
-
PWY0-1576
hydrogen to trimethylamine N-oxide electron transfer
-
-
PWY0-1578
IAA biosynthesis
-
-
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
inosine 5'-phosphate degradation
-
-
PWY-5695
Inositol phosphate metabolism
-
-
iron reduction and absorption
-
-
PWY-5934
isoflavonoid biosynthesis I
-
-
PWY-2002
isoleucine metabolism
-
-
isoprenoid biosynthesis
-
-
itaconate biosynthesis II
-
-
PWY-8018
itaconate degradation
-
-
PWY-5749
ketolysis
-
-
PWY66-368
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation II
-
-
PWY-5515
L-arginine biosynthesis III (via N-acetyl-L-citrulline)
-
-
PWY-5154
L-arginine degradation III (arginine decarboxylase/agmatinase pathway)
-
-
PWY0-823
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
ARGDEG-III-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-cysteine biosynthesis III (from L-homocysteine)
-
-
HOMOCYSDEGR-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
-
-
PWY-I9
L-histidine degradation III
-
-
PWY-5030
L-histidine degradation V
-
-
PWY-5031
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-isoleucine biosynthesis V
-
-
PWY-5108
L-isoleucine degradation II
-
-
PWY-5078
L-lactaldehyde degradation
-
-
L-leucine degradation III
-
-
PWY-5076
L-lysine biosynthesis I
-
-
DAPLYSINESYN-PWY
L-lysine biosynthesis II
-
-
PWY-2941
L-lysine biosynthesis VI
-
-
PWY-5097
L-lysine degradation I
-
-
PWY0-461
L-lysine degradation X
-
-
PWY-6328
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
L-methionine degradation III
-
-
PWY-5082
L-ornithine biosynthesis I
-
-
GLUTORN-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-proline degradation II (reductive Stickland reaction)
-
-
PWY-8186
L-threonine degradation I
-
-
PWY-5437
L-tryptophan degradation I (via anthranilate)
-
-
TRPCAT-PWY
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
-
-
PWY-5651
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation XI (mammalian, via kynurenine)
-
-
PWY-6309
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine biosynthesis
-
-
VALSYN-PWY
L-valine degradation II
-
-
PWY-5057
lactate fermentation
-
-
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
leucine metabolism
-
-
Linoleic acid metabolism
-
-
lipid A biosynthesis
-
-
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)
-
-
PWY2B4Q-4
lipid IVA biosynthesis (E. coli)
-
-
NAGLIPASYN-PWY
lipid IVA biosynthesis (generic)
-
-
PWY-8283
lipid IVA biosynthesis (H. pylori)
-
-
PWYI-14
lipid IVA biosynthesis (P. gingivalis)
-
-
PWY-8245
lipid IVA biosynthesis (P. putida)
-
-
PWY-8073
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)
-
-
PWY2G6Z-2
lipid metabolism
-
-
Lipopolysaccharide biosynthesis
-
-
lipoprotein posttranslational modification
-
-
PWY-7884
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
lupanine biosynthesis
-
-
PWY-5468
lupulone and humulone biosynthesis
-
-
PWY-5132
Lysine biosynthesis
-
-
Lysine degradation
-
-
lysine metabolism
-
-
macrolide antibiotic biosynthesis
-
-
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
melatonin degradation I
-
-
PWY-6398
Metabolic pathways
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylamine degradation I
-
-
PWY-6967
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
methylsalicylate degradation
-
-
PWY18C3-24
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
mycolate biosynthesis
-
-
PWYG-321
myo-inositol biosynthesis
-
-
N-acetylglucosamine degradation II
-
-
PWY-6517
NAD metabolism
-
-
NAD phosphorylation and dephosphorylation
-
-
NADPHOS-DEPHOS-PWY
NAD salvage (plants)
-
-
PWY-5381
NAD salvage pathway II (PNC IV cycle)
-
-
PWY-7761
NAD salvage pathway III (to nicotinamide riboside)
-
-
NAD-BIOSYNTHESIS-II
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to dimethyl sulfoxide electron transfer
-
-
PWY0-1348
NADH to fumarate electron transfer
-
-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
Naphthalene degradation
-
-
naringenin biosynthesis (engineered)
-
-
PWY-7397
Nicotinate and nicotinamide metabolism
-
-
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate assimilation
-
-
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction III (dissimilatory)
-
-
PWY0-1321
nitrate reduction IV (dissimilatory)
-
-
PWY-5674
nitrate reduction IX (dissimilatory)
-
-
PWY0-1581
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction VIII (dissimilatory)
-
-
PWY0-1352
nitrate reduction VIIIb (dissimilatory)
-
-
PWY0-1573
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
-
-
PWY-6549
Nitrotoluene degradation
-
-
nocardicin A biosynthesis
-
-
PWY-7797
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
O-Antigen nucleotide sugar biosynthesis
-
-
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
PWY-7388
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
One carbon pool by folate
-
-
ornithine metabolism
-
-
Other types of O-glycan biosynthesis
-
-
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
oxidative decarboxylation of pyruvate
-
-
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
palmitate biosynthesis
-
-
palmitate biosynthesis I (type I fatty acid synthase)
-
-
PWY-5994
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
-
-
PWY-8279
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
PWY-6282
Pantothenate and CoA biosynthesis
-
-
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
Penicillin and cephalosporin biosynthesis
-
-
pentachlorophenol degradation
-
-
PCPDEG-PWY
Pentose and glucuronate interconversions
-
-
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis I (meso-diaminopimelate containing)
-
-
PEPTIDOGLYCANSYN-PWY
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis III (mycobacteria)
-
-
PWY-6385
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan biosynthesis V (beta-lactam resistance)
-
-
PWY-6470
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
peptidoglycan recycling I
-
-
PWY0-1261
peptidoglycan recycling II
-
-
PWY-7883
petroselinate biosynthesis
-
-
PWY-5367
phenol degradation
-
-
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
phenylethanol biosynthesis
-
-
PWY-5751
phenylmercury acetate degradation
phospholipases
-
-
LIPASYN-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
Photosynthesis
-
-
photosynthesis light reactions
-
-
PWY-101
phytate degradation I
-
-
PWY-4702
phytol degradation
-
-
PWY66-389
pinobanksin biosynthesis
-
-
PWY-5059
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
plastoquinol-9 biosynthesis I
-
-
PWY-1581
polyamine pathway
-
-
Polyketide sugar unit biosynthesis
-
-
Porphyrin and chlorophyll metabolism
-
-
Porphyrin metabolism
-
-
proline metabolism
-
-
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
Propanoate metabolism
-
-
propanol degradation
-
-
propionate fermentation
-
-
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
putrescine biosynthesis I
-
-
PWY-40
putrescine biosynthesis II
-
-
PWY-43
pyrimidine deoxyribonucleosides degradation
-
-
PWY-7181
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyrimidine ribonucleosides degradation
-
-
PWY0-1295
pyrimidine ribonucleosides salvage I
-
-
PWY-7193
pyrimidine ribonucleosides salvage II
-
-
PWY-6556
pyruvate decarboxylation to acetyl CoA II
-
-
PWY-6970
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to acetate VIII
-
-
PWY-5768
pyruvate fermentation to acetoin III
-
-
PWY3O-440
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
-
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
-
-
CODH-PWY
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
Retinol metabolism
-
-
Riboflavin metabolism
-
-
S-adenosyl-L-methionine biosynthesis
-
-
SAM-PWY
S-adenosyl-L-methionine salvage I
-
-
PWY-6151
S-adenosyl-L-methionine salvage II
-
-
PWY-5041
salidroside biosynthesis
-
-
PWY-6802
Selenocompound metabolism
-
-
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
spermidine biosynthesis III
-
-
PWY-6834
sporopollenin precursors biosynthesis
-
-
PWY-6733
Starch and sucrose metabolism
-
-
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis III (fungi)
-
-
PWY3O-355
stearate biosynthesis IV
-
-
PWY-8280
Steroid hormone biosynthesis
-
-
streptorubin B biosynthesis
-
-
PWY1A0-6120
Styrene degradation
-
-
suberin monomers biosynthesis
-
-
PWY-1121
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sulfate reduction
-
-
sulfite oxidation I
-
-
PWY-5276
sulfoacetaldehyde degradation I
-
-
PWY-1281
sulfolactate degradation II
-
-
PWY-6637
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fatty acid biosynthesis initiation
-
-
FASYN-INITIAL-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
Taurine and hypotaurine metabolism
-
-
taurine biosynthesis III
-
-
PWY-8359
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Terpenoid backbone biosynthesis
-
-
tetrachloroethene degradation
-
-
PCEDEG-PWY
tetradecanoate biosynthesis (mitochondria)
-
-
PWY66-430
tetrahydrofolate metabolism
-
-
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
-
-
PWY-6613
thioredoxin pathway
-
-
THIOREDOX-PWY
thiosulfate disproportionation II (cytochrome)
-
-
PWY-5352
thiosulfate disproportionation III (quinone)
-
-
PWY-7813
threonine metabolism
-
-
toxoflavin biosynthesis
-
-
PWY-7991
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
tunicamycin biosynthesis
-
-
PWY-7821
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UTP and CTP dephosphorylation I
-
-
PWY-7185
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
Valine, leucine and isoleucine degradation
-
-
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin E biosynthesis (tocopherols)
-
-
PWY-1422
vitamin K-epoxide cycle
xylitol degradation I
-
-
LARABITOLUTIL-PWY
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
top
LINKS TO OTHER DATABASES (specific for Shewanella oneidensis)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA