Information on Organism Sphingomonas paucimobilis SYK-6

TaxTree of Organism Sphingomonas paucimobilis SYK-6
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
protocatechuate degradation I (meta-cleavage pathway)
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P184-PWY
Tyrosine metabolism
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00350
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Benzoate degradation
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00362
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Aminobenzoate degradation
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00627
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Microbial metabolism in diverse environments
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01120
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4-coumarate degradation (aerobic)
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PWY-8002
4-coumarate degradation (anaerobic)
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PWY-7046
pinoresinol degradation
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PWY-7982
trans-caffeate degradation (aerobic)
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PWY-8003
vanillin and vanillate degradation I
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PWY-7097
vanillin and vanillate degradation II
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PWY-7098
2-nitrotoluene degradation
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PWY-5641
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
phenol degradation
phenol degradation
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Chlorocyclohexane and chlorobenzene degradation
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00361
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Xylene degradation
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00622
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Styrene degradation
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00643
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Metabolic pathways
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01100
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3,4-dichlorobenzoate degradation
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PWY-6217
3-chlorobenzoate degradation II (via protocatechuate)
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PWY-6216
Polycyclic aromatic hydrocarbon degradation
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00624
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3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate
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HCAMHPDEG-PWY
cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate
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PWY-6690
3-phenylpropionate degradation
3-phenylpropionate degradation
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Phenylalanine metabolism
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00360
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2-hydroxybiphenyl degradation
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PWY-7008
biphenyl degradation
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PWY5F9-12
carbazole degradation
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PWY-6550
diphenyl ethers degradation
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PWY-7747
Dioxin degradation
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00621
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gallate degradation I
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GALLATE-DEGRADATION-II-PWY
1,5-anhydrofructose degradation
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PWY-6992
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
Amaryllidacea alkaloids biosynthesis
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PWY-7826
bupropion degradation
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PWY66-241
melatonin degradation I
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PWY-6398
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
vanillin biosynthesis I
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PWY-5665
arachidonic acid metabolism
arachidonic acid metabolism
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Fatty acid degradation
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00071
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Steroid hormone biosynthesis
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00140
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Caffeine metabolism
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00232
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Tryptophan metabolism
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00380
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Arachidonic acid metabolism
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00590
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Linoleic acid metabolism
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00591
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Retinol metabolism
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00830
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Metabolism of xenobiotics by cytochrome P450
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00980
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Drug metabolism - cytochrome P450
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00982
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Biosynthesis of secondary metabolites
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01110
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firefly bioluminescence
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PWY-7913
L-dopa and L-dopachrome biosynthesis
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PWY-6481
pheomelanin biosynthesis
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PWY-7917
Isoquinoline alkaloid biosynthesis
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00950
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Betalain biosynthesis
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00965
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ethylene biosynthesis III (microbes)
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PWY-6854
reactive oxygen species degradation
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DETOX1-PWY-1
superoxide radicals degradation
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DETOX1-PWY
non-pathway related
non-pathway related
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syringate degradation
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PWY-6339
glycine cleavage
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GLYCLEAV-PWY
Glycine, serine and threonine metabolism
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00260
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One carbon pool by folate
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00670
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4-hydroxy-2-nonenal detoxification
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PWY-7112
camalexin biosynthesis
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CAMALEXIN-SYN
gliotoxin biosynthesis
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PWY-7533
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
pentachlorophenol degradation
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PCPDEG-PWY
glutathione metabolism
glutathione metabolism
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Glutathione metabolism
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00480
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Drug metabolism - other enzymes
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00983
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methylerythritol phosphate pathway I
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NONMEVIPP-PWY
methylerythritol phosphate pathway II
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PWY-7560
isoprenoid biosynthesis
isoprenoid biosynthesis
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Terpenoid backbone biosynthesis
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00900
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Biosynthesis of antibiotics
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01130
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gallate degradation II
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GALLATE-DEGRADATION-I-PWY
methylgallate degradation
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METHYLGALLATE-DEGRADATION-PWY
gallate degradation
gallate degradation
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xyloglucan degradation II (exoglucanase)
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PWY-6807
degradation of hexoses
degradation of hexoses
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Other glycan degradation
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00511
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acetaldehyde biosynthesis II
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PWY-6330
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
chitin degradation to ethanol
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PWY-7118
L-methionine degradation III
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PWY-5082
long chain fatty acid ester synthesis (engineered)
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PWY-6873
pyruvate fermentation to acetate VIII
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PWY-5768
pyruvate fermentation to acetoin III
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PWY3O-440
pyruvate fermentation to ethanol II
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PWY-5486
ethanol fermentation
ethanol fermentation
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leucine metabolism
leucine metabolism
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valine metabolism
valine metabolism
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Glycolysis / Gluconeogenesis
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00010
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1,3-propanediol biosynthesis (engineered)
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PWY-7385
Calvin-Benson-Bassham cycle
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CALVIN-PWY
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV (plant cytosol)
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
glycolysis
glycolysis
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photosynthesis
photosynthesis
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Pentose phosphate pathway
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00030
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Fructose and mannose metabolism
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00051
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Methane metabolism
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00680
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Carbon fixation in photosynthetic organisms
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00710
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capsaicin biosynthesis
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PWY-5710
ferulate degradation
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PWY-6343
acetate conversion to acetyl-CoA
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PWY0-1313
adlupulone and adhumulone biosynthesis
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PWY-7857
cis-genanyl-CoA degradation
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PWY-6672
colupulone and cohumulone biosynthesis
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PWY-5133
ethanol degradation II
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PWY66-21
ethanol degradation III
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PWY66-161
ethanol degradation IV
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PWY66-162
L-isoleucine biosynthesis V
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PWY-5108
lupulone and humulone biosynthesis
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PWY-5132
acetate fermentation
acetate fermentation
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lipid metabolism
lipid metabolism
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propanol degradation
propanol degradation
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Pyruvate metabolism
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00620
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Glyoxylate and dicarboxylate metabolism
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00630
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Propanoate metabolism
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00640
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Carbon fixation pathways in prokaryotes
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00720
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itaconate degradation
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PWY-5749
TCA cycle III (animals)
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PWY66-398
citric acid cycle
citric acid cycle
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Citrate cycle (TCA cycle)
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00020
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8-amino-7-oxononanoate biosynthesis III
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PWY-6578
Biotin metabolism
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00780
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phosphopantothenate biosynthesis I
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PANTO-PWY
pantothenate biosynthesis
pantothenate biosynthesis
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beta-Alanine metabolism
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00410
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Pantothenate and CoA biosynthesis
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00770
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Sphingomonas paucimobilis SYK-6)
NCBI: Taxonomy, PubMed, Genome