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Information on Organism Xanthobacter autotrophicus

Synonyms:
ATCC 35674; BCRC 12235; CCRC 12235; CCRC:12235; CIP 105431; "Corynebacterium autotrophicum" Baumgarten et al. 1974; Corynebacterium autotrophicum; culture-collection:NRRL:B:14836; DSM 432; IAM 12579; IAM 12636; JCM 1202; LMG 7043; LMG:7043; NBRC 102463; NRRL B-14836; strain Py2; Xanthobacter autotrophicus (Baumgarten et al. 1974) Wiegel et al. 1978; Xanthobacter autotrophicus;
Word Map for Organism Xanthobacter autotrophicus
TaxTree of Organism Xanthobacter autotrophicus
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Hyphomicrobiales can be found in Brenda BRENDA pathways(order)
Xanthobacteraceae can be found in Brenda BRENDA pathways(family)
Xanthobacter can be found in Brenda BRENDA pathways(genus)
Xanthobacter autotrophicus can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
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PWY-7805
(S)-propane-1,2-diol degradation
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PWY-7013
(S)-reticuline biosynthesis
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(S)-reticuline biosynthesis I
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PWY-3581
(S)-reticuline biosynthesis II
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PWY-6133
1,2-dichloroethane degradation
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12DICHLORETHDEG-PWY
2-chloroacrylate degradation I
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PWY-7425
2-methylpropene degradation
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PWY-7778
2-nitrotoluene degradation
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PWY-5641
3-dehydroquinate biosynthesis I
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PWY-6164
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-hydroxy-2-nonenal detoxification
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PWY-7112
acetaldehyde biosynthesis I
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PWY-6333
acetone degradation II (to acetoacetate)
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PWY-5533
acetylene degradation (anaerobic)
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P161-PWY
aerobic toluene degradation
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Alanine, aspartate and glutamate metabolism
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alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-Linolenic acid metabolism
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ammonia assimilation cycle I
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PWY-6963
Arginine and proline metabolism
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bacterial bioluminescence
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PWY-7723
Benzoate degradation
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betalamic acid biosynthesis
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PWY-5394
bile acid biosynthesis, neutral pathway
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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butachlor degradation
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PWY-7771
Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Calvin-Benson-Bassham cycle
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
Caprolactam degradation
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Carbon fixation in photosynthetic organisms
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catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
catecholamine biosynthesis
Chloroalkane and chloroalkene degradation
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Chlorocyclohexane and chlorobenzene degradation
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cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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PWY-6946
cholesterol degradation to androstenedione III (anaerobic)
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PWY-8151
chorismate metabolism
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coenzyme M biosynthesis
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coenzyme M biosynthesis I
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P261-PWY
creatine phosphate biosynthesis
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PWY-6158
cutin biosynthesis
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PWY-321
cyclohexanol degradation
cytosolic NADPH production (yeast)
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PWY-7268
D-apionate degradation III (RLP transcarboxylase/hydrolase)
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PWY-8092
divinyl ether biosynthesis II
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PWY-5409
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
ethene and chloroethene degradation
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PWY-7776
Ether lipid metabolism
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Ethylbenzene degradation
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ethylbenzene degradation (anaerobic)
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PWY-481
Fatty acid degradation
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Fatty acid elongation
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fluoroacetate degradation
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PWY-6646
Folate biosynthesis
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formaldehyde oxidation VI (H4MPT pathway)
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PWY-1723
gamma-hexachlorocyclohexane degradation
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GAMMAHEXCHLORDEG-PWY
gliotoxin biosynthesis
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PWY-7533
glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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glyphosate degradation III
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PWY-7807
gossypol biosynthesis
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PWY-5773
heterolactic fermentation
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P122-PWY
hydrogen oxidation II (aerobic, NAD)
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PWY-5382
hydrogen production
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hydrogen production II
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PWY-6758
hydrogen production III
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PWY-6759
hydrogen production VI
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PWY-6780
hydrogen production VIII
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PWY-6785
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
isopenicillin N biosynthesis
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PWY-5629
isoprene degradation
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PWY-7777
Isoquinoline alkaloid biosynthesis
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jasmonic acid biosynthesis
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PWY-735
justicidin B biosynthesis
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PWY-6824
L-glutamate biosynthesis IV
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GLUGLNSYN-PWY
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
leucine metabolism
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linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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lipid metabolism
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matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methane oxidation to methanol I
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PWY-1641
methanogenesis from CO2
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methanogenesis from H2 and CO2
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METHANOGENESIS-PWY
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methoxylated aromatic compound degradation II
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PWY-8305
methyl-coenzyme M oxidation to CO2
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PWY-5209
Microbial metabolism in diverse environments
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mitochondrial NADPH production (yeast)
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PWY-7269
mixed acid fermentation
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FERMENTATION-PWY
NAD metabolism
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NAD phosphorylation and dephosphorylation
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NADPHOS-DEPHOS-PWY
NAD phosphorylation and transhydrogenation
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NADPHOS-DEPHOS-PWY-1
NAD(P)/NADPH interconversion
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PWY-5083
NADP biosynthesis
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PWY-8148
Naphthalene degradation
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naphthalene degradation (aerobic)
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PWY-5427
Nicotinate and nicotinamide metabolism
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nitrate assimilation
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nitrite-dependent anaerobic methane oxidation
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PWY-6523
nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
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non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
nucleoside and nucleotide degradation (archaea)
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PWY-5532
octane oxidation
oleate biosynthesis II (animals and fungi)
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PWY-5996
oxalate degradation II
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PWY-6695
Oxidative phosphorylation
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Penicillin and cephalosporin biosynthesis
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pentachlorophenol degradation
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PCPDEG-PWY
phenol degradation
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phenylethanol biosynthesis
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PWY-5751
photosynthesis
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phytol degradation
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PWY66-389
plasmalogen biosynthesis I (aerobic)
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PWY-7782
Polycyclic aromatic hydrocarbon degradation
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Primary bile acid biosynthesis
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propanol degradation
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propene degradation
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PWY-5534
Purine metabolism
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purine metabolism
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Pyrimidine metabolism
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pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to butanol II (engineered)
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PWY-6883
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway II (autotrophic methanogens)
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PWY-7784
Retinol metabolism
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rosmarinic acid biosynthesis II
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PWY-5049
Rubisco shunt
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PWY-5723
salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
serotonin metabolism
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sesamin biosynthesis
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PWY-5469
sporopollenin precursors biosynthesis
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PWY-6733
stearate biosynthesis I (animals)
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PWY-5972
stearate biosynthesis III (fungi)
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PWY3O-355
Styrene degradation
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suberin monomers biosynthesis
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PWY-1121
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
triacylglycerol degradation
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LIPAS-PWY
Tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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valine metabolism
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vitamin K-epoxide cycle
Xylene degradation
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
oxalate enrichment culture
Manually annotated by BRENDA team
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Manually annotated by BRENDA team
additional information
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not present at detectable levels in cells grown with carbon sources other than acetone
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Xanthobacter autotrophicus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA