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Information on Organism synthetic construct

artificial gene; artificial oligonucleotide; artificial sequence; artificial; primer; synthetic construct; synthetic constructs; synthetic DNA; synthetic oligonucleotides; synthetic; SYNTHETIC CONSTRUCT sequences;

TaxTree of Organism synthetic construct

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other entries can be found in Brenda

can be found in Brenda

BRENDA pathways

other sequences

artificial sequences can be found in Brenda

can be found in Brenda

BRENDA pathways

synthetic construct

can be found in Brenda

BRENDA pathways

(species)

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(1,4)-beta-D-xylan degradation

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PWY-6717

(5Z)-dodecenoate biosynthesis I

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PWY0-862

(5Z)-dodecenoate biosynthesis II

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PWY-7858

1,5-anhydrofructose degradation

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PWY-6992

3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)

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CHLOROPHYLL-SYN

3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)

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PWY-7159

3-methylthiopropanoate biosynthesis

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PWY-5389

8-amino-7-oxononanoate biosynthesis I

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PWY-6519

8-amino-7-oxononanoate biosynthesis IV

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PWY-8203

abietic acid biosynthesis

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PWY-5411

acetate and ATP formation from acetyl-CoA III

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PWY-8328

acetate conversion to acetyl-CoA

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PWY0-1313

acetate fermentation

acetate fermentation

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acetone degradation I (to methylglyoxal)

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PWY-5451

acetone degradation III (to propane-1,2-diol)

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PWY-7466

adlupulone and adhumulone biosynthesis

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PWY-7857

aerobic respiration I (cytochrome c)

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PWY-3781

aerobic respiration II (cytochrome c) (yeast)

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PWY-7279

alpha-linolenate metabolites biosynthesis

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PWY-8398

alpha-Linolenic acid metabolism

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Amaryllidacea alkaloids biosynthesis

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PWY-7826

Aminobenzoate degradation

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ammonia oxidation II (anaerobic)

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P303-PWY

anandamide biosynthesis I

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PWY-8051

anandamide biosynthesis II

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PWY-8053

androgen and estrogen metabolism

androgen and estrogen metabolism

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anteiso-branched-chain fatty acid biosynthesis

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PWY-8173

arachidonate biosynthesis

arachidonate biosynthesis

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arachidonate metabolites biosynthesis

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PWY-8397

Arachidonic acid metabolism

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arachidonic acid metabolism

arachidonic acid metabolism

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Arg/N-end rule pathway (eukaryotic)

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PWY-7799

arsenite to oxygen electron transfer

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PWY-4521

arsenite to oxygen electron transfer (via azurin)

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PWY-7429

Ascorbate and aldarate metabolism

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aspirin triggered resolvin D biosynthesis

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PWY66-395

aspirin triggered resolvin E biosynthesis

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PWY66-394

baicalein degradation (hydrogen peroxide detoxification)

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PWY-7214

betanidin degradation

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PWY-5461

Bifidobacterium shunt

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P124-PWY

Biosynthesis of ansamycins

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Biosynthesis of secondary metabolites

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Biotin metabolism

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Bisphenol degradation

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bupropion degradation

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PWY66-241

butanol and isobutanol biosynthesis (engineered)

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PWY-7396

C5-Branched dibasic acid metabolism

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Caffeine metabolism

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Calvin-Benson-Bassham cycle

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CALVIN-PWY

Carbon fixation in photosynthetic organisms

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Carbon fixation pathways in prokaryotes

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carbon monoxide oxidation to CO2

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PWY-7750

carbon tetrachloride degradation II

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PWY-5372

cellulose and hemicellulose degradation (cellulolosome)

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PWY-6784

chitin deacetylation

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PWY-7118

Chloroalkane and chloroalkene degradation

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chlorpyrifos degradation

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PWY-8065

cis-geranyl-CoA degradation

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PWY-6672

cis-vaccenate biosynthesis

CMP-3-deoxy-D-manno-octulosonate biosynthesis

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PWY-1269

CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis

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PWY-7674

CMP-KDO biosynthesis

CMP-KDO biosynthesis

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colupulone and cohumulone biosynthesis

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PWY-5133

Cysteine and methionine metabolism

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cysteine metabolism

cysteine metabolism

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D-galactose degradation II

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GALDEG-PWY

d-xylose degradation

d-xylose degradation

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degradation of aromatic, nitrogen containing compounds

degradation of aromatic, nitrogen containing compounds

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dehydroabietic acid biosynthesis

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PWY-5421

denitrification

denitrification

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di-homo-gamma-linolenate metabolites biosynthesis

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PWY-8396

Diterpenoid biosynthesis

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docosahexaenoate metabolites biosynthesis

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PWY-8400

dolichyl-diphosphooligosaccharide biosynthesis

dolichyl-diphosphooligosaccharide biosynthesis

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Drug metabolism - cytochrome P450

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Entner Doudoroff pathway

Entner Doudoroff pathway

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ethanol degradation II

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PWY66-21

ethanol degradation III

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PWY66-161

ethanol degradation IV

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PWY66-162

Ether lipid metabolism

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even iso-branched-chain fatty acid biosynthesis

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PWY-8175

Fatty acid biosynthesis

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Fatty acid degradation

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fatty acid elongation -- saturated

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FASYN-ELONG-PWY

Fe(II) oxidation

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PWY-6692

Folate biosynthesis

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folate transformations I

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PWY-2201

folate transformations II (plants)

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PWY-3841

folate transformations III (E. coli)

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1CMET2-PWY

formaldehyde assimilation II (assimilatory RuMP Cycle)

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PWY-1861

formaldehyde assimilation III (dihydroxyacetone cycle)

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P185-PWY

formate to dimethyl sulfoxide electron transfer

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PWY0-1356

formate to nitrite electron transfer

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PWY0-1585

Galactose metabolism

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Glutathione metabolism

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glutathione-peroxide redox reactions

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PWY-4081

Glycerophospholipid metabolism

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Glycolysis / Gluconeogenesis

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Glycosaminoglycan degradation

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Glyoxylate and dicarboxylate metabolism

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gondoate biosynthesis (anaerobic)

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PWY-7663

heme b biosynthesis I (aerobic)

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HEME-BIOSYNTHESIS-II

heme b biosynthesis V (aerobic)

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HEME-BIOSYNTHESIS-II-1

heme metabolism

heme metabolism

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hydrogen oxidation I (aerobic)

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P283-PWY

hydrogen oxidation II (aerobic, NAD)

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PWY-5382

hydrogen production

hydrogen production

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hydrogen production II

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PWY-6758

hydrogen production VI

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PWY-6780

hydrogen to dimethyl sulfoxide electron transfer

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PWY0-1577

icosapentaenoate metabolites biosynthesis

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PWY-8399

Inositol phosphate metabolism

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isoprenoid biosynthesis

isoprenoid biosynthesis

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Isoquinoline alkaloid biosynthesis

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justicidin B biosynthesis

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PWY-6824

L-cysteine degradation I

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CYSTEINE-DEG-PWY

L-isoleucine biosynthesis V

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PWY-5108

L-methionine biosynthesis I

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HOMOSER-METSYN-PWY

L-methionine biosynthesis II

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PWY-702

L-methionine biosynthesis III

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HSERMETANA-PWY

L-methionine salvage from L-homocysteine

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ADENOSYLHOMOCYSCAT-PWY

leucine metabolism

leucine metabolism

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linoleate metabolites biosynthesis

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PWY-8395

Linoleic acid metabolism

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lipid metabolism

lipid metabolism

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Lipopolysaccharide biosynthesis

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lupulone and humulone biosynthesis

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PWY-5132

luteolin triglucuronide degradation

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PWY-7445

maresin biosynthesis

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PWY-8356

matairesinol biosynthesis

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PWY-5466

melatonin degradation I

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PWY-6398

Metabolic pathways

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Metabolism of xenobiotics by cytochrome P450

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Methane metabolism

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methane oxidation to methanol I

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PWY-1641

methanogenesis from acetate

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METH-ACETATE-PWY

methionine metabolism

methionine metabolism

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methyl parathion degradation

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PWY-5489

methylerythritol phosphate pathway I

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NONMEVIPP-PWY

methylerythritol phosphate pathway II

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PWY-7560

Microbial metabolism in diverse environments

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mycolate biosynthesis

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PWYG-321

N-Glycan biosynthesis

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NADH to dimethyl sulfoxide electron transfer

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PWY0-1348

NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

Nicotinate and nicotinamide metabolism

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nicotine degradation IV

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PWY66-201

nicotine degradation V

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PWY66-221

nitrate reduction I (denitrification)

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DENITRIFICATION-PWY

nitrate reduction IV (dissimilatory)

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PWY-5674

nitrate reduction VII (denitrification)

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PWY-6748

nitrifier denitrification

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PWY-7084

nitrite-dependent anaerobic methane oxidation

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PWY-6523

Nitrogen metabolism

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Nitrotoluene degradation

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non-pathway related

non-pathway related

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o-diquinones biosynthesis

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PWY-6752

octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)

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PWY-7388

odd iso-branched-chain fatty acid biosynthesis

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PWY-8174

oleate biosynthesis IV (anaerobic)

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PWY-7664

One carbon pool by folate

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Other glycan degradation

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oxalate degradation IV

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PWY-6697

Oxidative phosphorylation

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oxidative phosphorylation

oxidative phosphorylation

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palmitate biosynthesis

palmitate biosynthesis

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palmitate biosynthesis II (type II fatty acid synthase)

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PWY-5971

palmitate biosynthesis III

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PWY-8279

palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)

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PWY-6282

paraoxon degradation

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PWY-5490

parathion degradation

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PARATHION-DEGRADATION-PWY

Penicillin and cephalosporin biosynthesis

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Pentose and glucuronate interconversions

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Pentose phosphate pathway

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pentose phosphate pathway

pentose phosphate pathway

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pentose phosphate pathway (non-oxidative branch) I

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NONOXIPENT-PWY

pentose phosphate pathway (non-oxidative branch) II

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PWY-8178

pentose phosphate pathway (partial)

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P21-PWY

peptido-conjugates in tissue regeneration biosynthesis

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PWY-8355

petroselinate biosynthesis

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PWY-5367

Phenylpropanoid biosynthesis

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phosphatidylcholine acyl editing

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PWY-6803

phospholipases

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LIPASYN-PWY

phospholipid remodeling (phosphatidate, yeast)

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PWY-7417

phospholipid remodeling (phosphatidylcholine, yeast)

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PWY-7416

phospholipid remodeling (phosphatidylethanolamine, yeast)

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PWY-7409

photosynthesis

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plasmalogen degradation

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PWY-7783

Porphyrin and chlorophyll metabolism

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Propanoate metabolism

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propanol degradation

propanol degradation

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protectin biosynthesis

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PWY-8357

protein N-glycosylation (Haloferax volcanii)

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PWY-7661

protein N-glycosylation initial phase (eukaryotic)

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MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS

protein O-mannosylation I (yeast)

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PWY-7921

protein O-mannosylation II (mammals, core M1 and core M2)

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PWY-7922

protein O-mannosylation III (mammals, core M3)

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PWY-7979

Purine metabolism

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purine metabolism

purine metabolism

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Pyruvate metabolism

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reactive oxygen species degradation

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DETOX1-PWY-1

reductive acetyl coenzyme A pathway

reductive acetyl coenzyme A pathway

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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)

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CODH-PWY

reductive glycine pathway of autotrophic CO2 fixation

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PWY-8303

resolvin D biosynthesis

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PWY66-397

Retinol metabolism

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Rubisco shunt

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PWY-5723

rutin degradation

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PWY-6848

S-adenosyl-L-methionine salvage I

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PWY-6151

S-adenosyl-L-methionine salvage II

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PWY-5041

seleno-amino acid biosynthesis (plants)

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PWY-6936

Selenocompound metabolism

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serotonin and melatonin biosynthesis

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PWY-6030

serotonin metabolism

serotonin metabolism

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sesamin biosynthesis

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PWY-5469

stearate biosynthesis II (bacteria and plants)

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PWY-5989

stearate biosynthesis IV

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PWY-8280

Steroid hormone biosynthesis

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streptorubin B biosynthesis

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PWY1A0-6120

succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

sulfate reduction

sulfate reduction

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sulfide oxidation IV (mitochondria)

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PWY-7927

sulfite oxidation IV (sulfite oxidase)

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PWY-5326

Sulfur metabolism

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superpathway of glucose and xylose degradation

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PWY-6901

Taurine and hypotaurine metabolism

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taurine biosynthesis I

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PWY-5331

taurine biosynthesis II

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PWY-7850

Terpenoid backbone biosynthesis

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tetrachloroethene degradation

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PCEDEG-PWY

tetradecanoate biosynthesis (mitochondria)

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PWY66-430

tRNA processing

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PWY0-1479

Tryptophan metabolism

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Tyrosine metabolism

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Valine, leucine and isoleucine biosynthesis

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Valine, leucine and isoleucine degradation

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vanillin biosynthesis I

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PWY-5665

Vitamin B6 metabolism

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xanthommatin biosynthesis

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PWY-8249

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synthetic construct

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synthetic construct

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Manually annotated by BRENDA team

synthetic construct

AY916795

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Manually annotated by BRENDA team

synthetic construct

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the fusion nucleoprotein with a tPA signal sequence

Manually annotated by BRENDA team

synthetic construct

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cytosolic AC activity overwhelms the barrier-protective effects of transmembrane AC activity in the formation of endothelial cells gaps

Manually annotated by BRENDA team

synthetic construct

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furin localizes to endosomes when Mint3 expression is knocked down

Manually annotated by BRENDA team

Golgi apparatus

synthetic construct

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interaction between the phosphotyrosine-binding domain of Mint3 and the acidic peptide signal in the cytoplasmic domain of furin regulates the specific localization of furin in the trans-Golgi network. The phosphotyrosine-binding domain of Mint3 is essential for furin-Mint3 interaction

Manually annotated by BRENDA team

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synthetic construct

AY916795

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Manually annotated by BRENDA team

plasma membrane

synthetic construct

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Manually annotated by BRENDA team

synthetic construct

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Manually annotated by BRENDA team

additional information

synthetic construct

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all of the addressing sequences, containing transmembrane domains, provide effective insertion of the hybrid proteins AAC-mCYP11A1, Bcs1p(1-83)-mCYP11A1, DLD(1-72)-mCYP11A1 and Su9(1-116)-mCYP11A1 into the mitochondrial inner membrane. preAd-mCYP11A1 hybrid molecules are translocated across the inner membrane and tightly associated with the membrane on its matrix side but not membrane inserted. The mechanism of Ad-mCYP11A1 hybrid topogenesis in Escherichia coli cells differs from that of the topogenesis of its precursor form in yeast mitochondria

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)