Cloned (Comment) | Organism |
---|---|
gene Cthe_2949, sequence comparisons and phylogenetic analysis | Acetivibrio thermocellus |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
pectin + n H2O | Acetivibrio thermocellus | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus DSM 1237 | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus NBRC 103400 | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus ATCC 27405 | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus VPI 7372 | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus NCIMB 10682 | - |
n methanol + pectate | - |
? | |
pectin + n H2O | Acetivibrio thermocellus NRRL B-4536 | - |
n methanol + pectate | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Acetivibrio thermocellus | A3DJL8 | - |
- |
Acetivibrio thermocellus ATCC 27405 | A3DJL8 | - |
- |
Acetivibrio thermocellus DSM 1237 | A3DJL8 | - |
- |
Acetivibrio thermocellus NBRC 103400 | A3DJL8 | - |
- |
Acetivibrio thermocellus NCIMB 10682 | A3DJL8 | - |
- |
Acetivibrio thermocellus NRRL B-4536 | A3DJL8 | - |
- |
Acetivibrio thermocellus VPI 7372 | A3DJL8 | - |
- |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
pectin + n H2O | - |
Acetivibrio thermocellus | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus DSM 1237 | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus NBRC 103400 | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus ATCC 27405 | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus VPI 7372 | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus NCIMB 10682 | n methanol + pectate | - |
? | |
pectin + n H2O | - |
Acetivibrio thermocellus NRRL B-4536 | n methanol + pectate | - |
? |
Subunits | Comment | Organism |
---|---|---|
More | analysis of secondary structure of CtPME shows alpha-helices (3.1%), beta-sheets (40.1%) and random coils (56.9%). Three-dimensional enzyme structure analysis and structure comparisons, overview | Acetivibrio thermocellus |
Synonyms | Comment | Organism |
---|---|---|
Cthe_2949 | - |
Acetivibrio thermocellus |
CtPME | - |
Acetivibrio thermocellus |
PME | - |
Acetivibrio thermocellus |
psectin methylesterase | - |
Acetivibrio thermocellus |
General Information | Comment | Organism |
---|---|---|
evolution | the enzyme belongs to the family 8 of carbohydrate esterases (CE8) of the pectin methylesterase superfamily | Acetivibrio thermocellus |
additional information | analysis of the conserved and semi-conserved amino acid residues, homology modelling of CtPME structure reveals a characteristic right handed parallel alpha-helices, structure comparisons, overview. Molecular dynamic simulation of CtPME modelled structure, docking study of CtPME. Active site and ligand binding structures | Acetivibrio thermocellus |