Protein Variants | Comment | Organism |
---|---|---|
D134a/H135A/H136A | mutation in DHH domain, complete loss of catalytic activity | Mycolicibacterium smegmatis |
G313A/G314A/G315A/H316A | mutation in DHHA1 domain, mutasnt displays residual activity | Mycolicibacterium smegmatis |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.0068 | - |
cyclic di-3',5'-adenylate | pH 7.8, 37°C | Mycolicibacterium smegmatis | |
0.0809 | - |
cyclic di-3',5'-guanylate | pH 7.8, 37°C | Mycolicibacterium smegmatis |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Co2+ | Pde is strictly dependent on Co2+, Mn2+, Mg2+ or Fe2+, with maximum activity with Mn2+ as a cofactor | Mycolicibacterium smegmatis | |
Fe2+ | Pde is strictly dependent on Co2+, Mn2+, Mg2+ or Fe2+, with maximum activity with Mn2+ as a cofactor | Mycolicibacterium smegmatis | |
Mg2+ | Pde is strictly dependent on Co2+, Mn2+, Mg2+ or Fe2+, with maximum activity with Mn2+ as a cofactor | Mycolicibacterium smegmatis | |
Mn2+ | Pde is strictly dependent on Co2+, Mn2+, Mg2+ or Fe2+, with maximum activity with Mn2+ as a cofactor | Mycolicibacterium smegmatis |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
cyclic di-3',5'-adenylate + H2O | Mycolicibacterium smegmatis | - |
5'-O-phosphonoadenylyl-(3'->5')-adenosine | - |
? | |
cyclic di-3',5'-adenylate + H2O | Mycolicibacterium smegmatis ATCC 700084 | - |
5'-O-phosphonoadenylyl-(3'->5')-adenosine | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Mycolicibacterium smegmatis | A0QVM9 | protein contains a DHH-DHHAI domain | - |
Mycolicibacterium smegmatis ATCC 700084 | A0QVM9 | protein contains a DHH-DHHAI domain | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
cyclic di-3',5'-adenylate + H2O | - |
Mycolicibacterium smegmatis | 5'-O-phosphonoadenylyl-(3'->5')-adenosine | - |
? | |
cyclic di-3',5'-adenylate + H2O | - |
Mycolicibacterium smegmatis ATCC 700084 | 5'-O-phosphonoadenylyl-(3'->5')-adenosine | - |
? | |
cyclic di-3',5'-guanylate + H2O | - |
Mycolicibacterium smegmatis | 5'-phosphoguanylyl-(3'->5')guanosine | - |
? | |
cyclic di-3',5'-guanylate + H2O | - |
Mycolicibacterium smegmatis ATCC 700084 | 5'-phosphoguanylyl-(3'->5')guanosine | - |
? | |
additional information | Pde is capable of converting c-di-AMP to pApA, i.e. 5'-O-phosphonoadenylyl-(3'->5')-adenosine and AMP, and hydrolyzing pApA to AMP | Mycolicibacterium smegmatis | ? | - |
? | |
additional information | Pde is capable of converting c-di-AMP to pApA, i.e. 5'-O-phosphonoadenylyl-(3'->5')-adenosine and AMP, and hydrolyzing pApA to AMP | Mycolicibacterium smegmatis ATCC 700084 | ? | - |
? |
Synonyms | Comment | Organism |
---|---|---|
MSMEG_2630 | - |
Mycolicibacterium smegmatis |
PDE | - |
Mycolicibacterium smegmatis |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
37 | - |
assay at | Mycolicibacterium smegmatis |
37 | 50 | - |
Mycolicibacterium smegmatis |
Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.03 | - |
cyclic di-3',5'-guanylate | pH 7.8, 37°C | Mycolicibacterium smegmatis | |
0.52 | - |
cyclic di-3',5'-adenylate | pH 7.8, 37°C | Mycolicibacterium smegmatis |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
7.5 | - |
- |
Mycolicibacterium smegmatis |
General Information | Comment | Organism |
---|---|---|
physiological function | deficiency of Pde significantly enhances intracellular C12-C20 fatty acid accumulation. Superfluous c-di-AMP in Mycobacterium smegmatis may lead to abnormal colonial morphology | Mycolicibacterium smegmatis |