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Literature summary extracted from

  • Birks, S.J.; Kelly, D.J.
    Assay and properties of acetone carboxylase, a novel enzyme involved in acetone-dependent growth and CO2 fixation in Rhodobacter capsulatus and other photosynthetic and denitrifying bacteria (1997), Microbiology, 143, 755-766.
    View publication on PubMed

Activating Compound

EC Number Activating Compound Comment Organism Structure
6.4.1.6 acetyl-CoA
-
Paracoccus pantotrophus
6.4.1.6 acetyl-CoA dependent on, gives more reproducible and larger degree of stimulation than CoA Rhodobacter capsulatus
6.4.1.6 CoA stimulates acetone-dependent CO2 fixation Rhodobacter capsulatus
6.4.1.6 NAD(P)H
-
Rhodobacter capsulatus

Inhibitors

EC Number Inhibitors Comment Organism Structure
6.4.1.6 ATP in high concentrations Rhodobacter capsulatus

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
6.4.1.6 0.03
-
acetone
-
Rhodobacter capsulatus

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
6.4.1.6 Mg2+ required for assay, stimulating Rhodobacter capsulatus

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
6.4.1.6 70000
-
x * 70000 + x * 85000, also 60000 Da and small amounts of 35000 Da subunits exist, SDS-PAGE Rhodobacter capsulatus
6.4.1.6 85000
-
x * 70000 + x * 85000, also 60000 Da and small amounts of 35000 Da subunits exist, SDS-PAGE Rhodobacter capsulatus

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
6.4.1.6 acetone + CO2 + ATP + H2O Rhodobacter capsulatus initial step in acetone metabolism acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O Rhodobacter capsulatus PAS100 initial step in acetone metabolism acetoacetate + AMP + phosphate
-
?

Organism

EC Number Organism UniProt Comment Textmining
6.4.1.6 Paracoccus pantotrophus
-
LMD82.1
-
6.4.1.6 Paracoccus pantotrophus LMD82.1
-
LMD82.1
-
6.4.1.6 Rhodobacter capsulatus
-
PAS100
-
6.4.1.6 Rhodobacter capsulatus PAS100
-
PAS100
-
6.4.1.6 Rhodomicrobium vannielii
-
RB4
-
6.4.1.6 Rhodomicrobium vannielii RB4
-
RB4
-

Purification (Commentary)

EC Number Purification (Comment) Organism
6.4.1.6 ion-exchange chromatography Rhodobacter capsulatus

Reaction

EC Number Reaction Comment Organism Reaction ID
6.4.1.6 acetone + CO2 + ATP + 2 H2O = acetoacetate + AMP + 2 phosphate biotin-independent, activity is strongly induced by growth on acetone Rhodobacter capsulatus

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
6.4.1.6 additional information
-
a few hundred pmol per minute and mg protein Rhodobacter capsulatus

Storage Stability

EC Number Storage Stability Organism
6.4.1.6 -20°C Rhodobacter capsulatus

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
6.4.1.6 acetone + CO2 + ATP + H2O
-
Rhodomicrobium vannielii acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O
-
Paracoccus pantotrophus acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O phosphate buffer, CoA and magnesium ions needed Rhodobacter capsulatus acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O initial step in acetone metabolism Rhodobacter capsulatus acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O phosphate buffer, CoA and magnesium ions needed Rhodobacter capsulatus PAS100 acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O initial step in acetone metabolism Rhodobacter capsulatus PAS100 acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O
-
Rhodomicrobium vannielii RB4 acetoacetate + AMP + phosphate
-
?
6.4.1.6 acetone + CO2 + ATP + H2O
-
Paracoccus pantotrophus LMD82.1 acetoacetate + AMP + phosphate
-
?
6.4.1.6 butanone + CO2 + ATP + H2O
-
Rhodobacter capsulatus 3-oxopentanoate + AMP + phosphate
-
?
6.4.1.6 butanone + CO2 + ATP + H2O
-
Rhodobacter capsulatus PAS100 3-oxopentanoate + AMP + phosphate
-
?

Subunits

EC Number Subunits Comment Organism
6.4.1.6 ? x * 70000 + x * 85000, also 60000 Da and small amounts of 35000 Da subunits exist, SDS-PAGE Rhodobacter capsulatus

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
6.4.1.6 30
-
assay at Rhodobacter capsulatus

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
6.4.1.6 7.2
-
-
Rhodobacter capsulatus

Cofactor

EC Number Cofactor Comment Organism Structure
6.4.1.6 ATP
-
Rhodobacter capsulatus