Information on Organism Xanthobacter flavus

TaxTree of Organism Xanthobacter flavus
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
Caprolactam degradation
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cyclohexanol degradation
Microbial metabolism in diverse environments
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acetate fermentation
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acetyl-CoA biosynthesis II (NADP-dependent pyruvate dehydrogenase)
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oxidative decarboxylation of pyruvate
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Biosynthesis of secondary metabolites
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Carbon fixation in photosynthetic organisms
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Glycolysis / Gluconeogenesis
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Metabolic pathways
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photosynthesis
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1,2,4-trichlorobenzene degradation
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1,2-dichlorobenzene degradation
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1,3-dichlorobenzene degradation
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1,4-dichlorobenzene degradation
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2,4-dichlorotoluene degradation
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2,5-dichlorotoluene degradation
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3,4-dichlorotoluene degradation
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3-chlorotoluene degradation I
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chlorobenzene degradation
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Chlorocyclohexane and chlorobenzene degradation
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ethanol degradation IV
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Glyoxylate and dicarboxylate metabolism
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methanol oxidation to formaldehyde IV
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non-pathway related
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reactive oxygen species degradation
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superoxide radicals degradation
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Tryptophan metabolism
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1,2,4,5-tetrachlorobenzene degradation
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Bifidobacterium shunt
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Biosynthesis of ansamycins
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Calvin-Benson-Bassham cycle
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formaldehyde assimilation II (assimilatory RuMP Cycle)
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formaldehyde assimilation III (dihydroxyacetone cycle)
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (non-oxidative branch)
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pentose phosphate pathway (partial)
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Rubisco shunt
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superpathway of glucose and xylose degradation
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(S)-lactate fermentation to propanoate, acetate and hydrogen
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Butanoate metabolism
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ethanol fermentation
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mixed acid fermentation
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Propanoate metabolism
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pyruvate fermentation to acetate IV
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pyruvate fermentation to ethanol I
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Pyruvate metabolism
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reductive monocarboxylic acid cycle
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superpathway of fermentation (Chlamydomonas reinhardtii)
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threonine metabolism
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1-butanol autotrophic biosynthesis (engineered)
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Entner-Doudoroff pathway I
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gluconeogenesis I
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gluconeogenesis III
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glycerol degradation to butanol
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glycolysis
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glycolysis I (from glucose 6-phosphate)
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glycolysis II (from fructose 6-phosphate)
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glycolysis III (from glucose)
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glycolysis IV (plant cytosol)
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heterolactic fermentation
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sucrose biosynthesis I (from photosynthesis)
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oxalate degradation II
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degradation of pentoses
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photorespiration
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fructose 2,6-bisphosphate biosynthesis
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Fructose and mannose metabolism
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formaldehyde oxidation VI (H4MPT pathway)
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Methane metabolism
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methanogenesis from CO2
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methanogenesis from H2 and CO2
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reductive acetyl coenzyme A pathway II (autotrophic methanogens)
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1,2-dichloroethane degradation
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butachlor degradation
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Chloroalkane and chloroalkene degradation
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fluoroacetate degradation
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gamma-hexachlorocyclohexane degradation
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nucleoside and nucleotide degradation (archaea)
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purine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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vitamin K-epoxide cycle
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1,3-propanediol biosynthesis (engineered)
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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glycolysis V (Pyrococcus)
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sucrose degradation V (sucrose alpha-glucosidase)
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Pentose and glucuronate interconversions
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Inositol phosphate metabolism
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3-chlorocatechol degradation
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3-chlorocatechol degradation I (ortho)
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3-chlorocatechol degradation II (ortho)
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4,5-dichlorocatechol degradation
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4-chlorocatechol degradation
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4-methylcatechol degradation (ortho cleavage)
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5-chloro-3-methyl-catechol degradation
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chlorosalicylate degradation
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Fluorobenzoate degradation
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Toluene degradation
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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oxalate enrichment culture
Manually annotated by BRENDA team
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soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Manually annotated by BRENDA team
LINKS TO OTHER DATABASES (specific for Xanthobacter flavus)